LOCUS AK289933 1355 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77645 complete cds, highly similar to Homo
sapiens splicing factor, arginine/serine-rich 1 (splicing factor
2, alternate splicing factor) (SFRS1), mRNA.
ACCESSION AK289933
VERSION AK289933.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1355)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1355
/clone="BRHIP2011074"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000422730"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 119..865
/codon_start=1
/note="highly similar to Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing factor) (SFRS1), mRNA"
/protein_id="BAF82622.1"
/transl_table=1
/translation="MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRD
IDLKNRRGGPPFAFVEFEDPQDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGG
GGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGAV
EFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSR
SNSRSRSYSPRRSRGSPRYSPRHSRSRSRT"
BASE COUNT 317 a 284 c 381 g 373 t
ORIGIN
1 attaaaggcg ccattttgga ggggccgcgg gagacgtggt gccgctgcgg gctcgctctg
61 ccgtgcgcta ggcttggtgg gaaggcctgt tctcgagtcc gcgcttttcg tcaccgccat
121 gtcgggaggt ggtgtgattc gtggccccgc agggaacaac gattgccgca tctacgtggg
181 taacttacct ccagacatcc gaaccaagga cattgaggac gtgttctaca aatacggcgc
241 tatccgcgac atcgacctca agaatcgccg cgggggaccg cccttcgcct tcgttgagtt
301 cgaggacccg caagacgcgg aagacgcggt gtatggtcgc gacggctatg attacgatgg
361 gtaccgtctg cgggtggagt ttcctcgaag cggccgtgga acaggccgag gcggcggcgg
421 gggtggaggt ggcggagctc cccgaggtcg ctatggcccc ccatccaggc ggtctgaaaa
481 cagagtggtt gtctctggac tgcctccaag tggaagttgg caggatttaa aggatcacat
541 gcgtgaagca ggtgatgtat gttatgctga tgtttaccga gatggcactg gtgccgtgga
601 gtttgtacgg aaagaagata tgacctatgc agttcgaaaa ctggataaca ctaagtttag
661 atctcatgag ggagaaactg cctacatccg ggttaaagtt gatgggccca gaagtccaag
721 ttatggaaga tctcgatctc gaagccgtag tcgtagcaga agccgtagca gaagcaacag
781 caggagtcgc agttactccc caaggagaag cagaggatca ccacgctatt ctccccgtca
841 tagcagatct cgctctcgta cataagatga ttggtgacac tttttgtaga acccatgttg
901 tatacagttt tcctttattc agtacaatct tttcattttt taattcaaac tgttttgttc
961 agaatgggct aaagtgttga attgcattct tgtaatatcc ccttgctcct aacatctaca
1021 ttcccttcgt gtctttgata aattgtattt taagtgatgt catagacagg attgtttaaa
1081 tttagttaac tccatactct tcagactgtg atattgtgta aatgtctatc tgccctggtt
1141 tgtgtgaact gggatgttgg gggtgtttgt ggttatctta cctggggaag ttcttatgtt
1201 tatcttgctt ttcatgtgtc tttctgtaga catatctgaa gagatggatt aagaatgctt
1261 tggattaagg attgtggagc acatttcaat cattttagga ttgtcaaaag gaggattgag
1321 gaggatcaga tcaataatgg aggcaatggt atgac
//