LOCUS AK289892 1007 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75413 complete cds, highly similar to Homo
sapiens sarcoglycan, beta (43kDa dystrophin-associated
glycoprotein) (SGCB), mRNA.
ACCESSION AK289892
VERSION AK289892.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1007)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1007
/clone="BRCOC2002882"
/clone_lib="BRCOC2"
/db_xref="H-InvDB:HIT000422689"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="corpus callosum"
CDS 39..995
/codon_start=1
/note="highly similar to Homo sapiens sarcoglycan, beta
(43kDa dystrophin-associated glycoprotein) (SGCB), mRNA"
/protein_id="BAF82581.1"
/transl_table=1
/translation="MAAAAAAAAEQQSSNGPVKKSMREKAVERRSVNKEHNSNFKAGY
IPIDEDRLHKTGLRGRKGNLAICVIILLFILAVINLIITLVIWAVIRIGPNGCDSMEF
HESGLLRFKQVSDMGVIHPLYKSTVGGRRNENLVITGNNQPIVFQQGTTKLSVENNKT
SITSDIGMQFFDPRTQNILFSTDYETHEFHLPSGVKSLNVQKASTERITSNATSDLNI
KVDGRAIVRGNEGVFIMGKTIEFHMGGNMELKAENSIILNGSVMVSTTRLPSSSSGDQ
LGSGDWVRYKLCMCADGTLFKVQVTSQNMGCQISDNPCGNTH"
BASE COUNT 304 a 197 c 261 g 245 t
ORIGIN
1 agtcgggcgg ggagctcggc ggcggcgggc gcgggaagat ggcggcagcg gcggcggcgg
61 ctgcagaaca gcaaagttcc aatggtcctg taaagaagtc catgcgtgag aaggctgttg
121 agagaaggag tgtcaataaa gagcacaaca gtaactttaa agctggatac attccgattg
181 atgaagatcg tctccacaaa acagggttga gaggaagaaa gggcaattta gccatctgtg
241 tgattatcct cttgtttatc ctggctgtca tcaatttaat aataacactt gttatttggg
301 ccgtgattcg cattggacca aatggctgtg atagtatgga gtttcatgaa agtggcctgc
361 ttcgatttaa gcaagtatct gacatgggag tgatccaccc tctttataaa agcacagtag
421 gaggaaggcg aaatgaaaat ttggtcatca ctggcaacaa ccagcctatt gtttttcagc
481 aagggacaac aaagctcagt gtagaaaaca acaaaacttc tattacaagt gacatcggca
541 tgcagttttt tgacccgagg actcaaaata tcttattcag cacagactat gaaactcatg
601 agtttcattt gccaagtgga gtgaaaagtt tgaatgttca aaaggcatct actgaaagga
661 ttaccagcaa tgctaccagt gatttaaata taaaagttga tgggcgtgct attgtgcgtg
721 gaaatgaagg tgtattcatt atgggcaaaa ccattgaatt tcacatgggt ggtaatatgg
781 agttaaaggc ggaaaacagt atcatcctaa atggatctgt gatggtcagc accacccgcc
841 tacccagttc ctccagtgga gaccagttgg gtagtggtga ctgggtacgc tacaagctct
901 gcatgtgtgc tgatgggacg ctcttcaagg tgcaagtaac cagccagaac atgggctgcc
961 aaatctcaga caacccctgt ggaaacactc attaaaagaa ccccaga
//