LOCUS AK289870 1395 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75998 complete cds, highly similar to Homo
sapiens potassium channel tetramerisation domain containing 1
(KCTD1), mRNA.
ACCESSION AK289870
VERSION AK289870.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1395)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1395
/clone="BRCAN2010926"
/clone_lib="BRCAN2"
/db_xref="H-InvDB:HIT000422667"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="caudate nucleus"
CDS 247..1020
/codon_start=1
/note="highly similar to Homo sapiens potassium channel
tetramerisation domain containing 1 (KCTD1), mRNA"
/protein_id="BAF82559.1"
/transl_table=1
/translation="MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSS
LATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDF
KDYTLLYEEAKYFQLQPMLLEMERWKQDRETGRFSRPCKCLVVRVAPDLGERITLSGD
KSLIEEVFPEIGDVMCNSVNAGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIV
GSCGGGVDSSQFSEYVLRRELRRTPRVPSVIRIKQEPLD"
BASE COUNT 394 a 375 c 333 g 293 t
ORIGIN
1 aacctgcctg ctccgctccg ctccgggcgg ccccagacac gggtttcccg cggcagcacc
61 cgcggcccgc ccggcgcagc cgccgccccg accccccggc tccggggggc aatgaggggg
121 cagtggaagg ggcactgctc ctcgggcatt acttagagaa acaagaccgt cccgccctct
181 cgccggccct ccctctctcc cgcccgggcc cgcgcaattc tccgccagag ggacagtcgg
241 cccaatatgt caagacctct gatcactaga tcccctgcat ctccactgaa caaccaaggc
301 atccctactc cagcacaact cacaaaatcc aatgcgcctg tccacattga tgtgggcggc
361 cacatgtaca ccagcagcct ggccaccctc accaaatacc ctgaatccag aatcggaaga
421 ctttttgatg gtacagagcc cattgttttg gacagtctca aacagcacta tttcattgac
481 agagatggac agatgttcag atatatcttg aattttctac gaacatccaa actcctcatt
541 cctgatgatt tcaaggacta cactttgtta tatgaagagg caaaatattt tcagcttcag
601 cccatgttgt tggagatgga aagatggaag caggacagag aaactggtcg attttcaagg
661 ccctgtaagt gcctcgtcgt gcgtgtggcc ccagacctcg gagaaaggat cacgctaagc
721 ggtgacaaat ccttgataga agaagtattt ccagagatcg gcgacgtgat gtgtaactct
781 gtcaatgcag gctggaatca cgactcgacg cacgtcatca ggtttccact aaatggctac
841 tgtcacctca actcagtcca ggtcctcgag aggttgcagc aaagaggatt tgaaatcgtg
901 ggctcctgtg ggggaggagt agactcgtcc cagttcagcg aatacgtcct tcggcgggaa
961 ctgaggcgga cgccccgtgt accctccgtc atccggataa agcaagagcc tctggactaa
1021 atggacatat ttcttatgca aaaaggaaaa cacacacaac caataactca aacaaaaaag
1081 ggacatttat gtgcagttgg gacagcaaac caagtcctgg acgtaaaatc gaataaaaga
1141 cacatttata tccaatagag accacacctg tattcatatg ggaacaattg gaatagtgat
1201 atcctcaagg tgtaaaaaat atataaatat atatatatat gtcaaaaggt aggaaatgca
1261 aaaaagaaaa aaaaaaaagg tgacagccgc agttggtgct gtgatggccg tgaagtgtcc
1321 tgggcctccc gaggcctctg acaaataaac aagccatgag tggtgaggac acagtctcct
1381 tacagtttcc attgc
//