LOCUS AK289821 2327 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76337 complete cds, highly similar to Homo
sapiens peroxisome proliferative activated receptor, alpha(PPARA),
transcript variant 3, mRNA.
ACCESSION AK289821
VERSION AK289821.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2327)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2327
/clone="BRAWH3035758"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000422618"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 560..1966
/codon_start=1
/note="highly similar to Homo sapiens peroxisome
proliferative activated receptor, alpha(PPARA),
transcript variant 3, mRNA"
/protein_id="BAF82510.1"
/transl_table=1
/translation="MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGED
SSGSFGFTEYQYLGSCPGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIEC
RICGDKASGYHYGVHACEGCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHK
CLSVGMSHNAIRFGRMPRSEKAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNF
NMNKVKARVILSGKASNNPPFVIHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCC
QCTSVETVTELTEFAKAIPGFANLDLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAY
GNGFITREFLKSLRKPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLL
NVGHIEKMQEGIVHVLRLHLQSNHPDDIFLFPKLLQKMADLRQLVTEHAQLVQIIKKT
ESDAALHPLLQEIYRDMY"
BASE COUNT 581 a 588 c 634 g 524 t
ORIGIN
1 gtgcgcggct ggggacctga gggcgaggag cgaggacaca caccgaggac tcttgcgagg
61 gatctcgggg cccagctcgg cctccctcct agcgctgggg gcctgcccgg aacccgagtc
121 cgcggctgtc cctggggttt ggcgctgcgc ggaggtcggg tctggggacc gcagcgactc
181 tgggtcttcg ggttgtcccc tcggagggag ggcccacggg cggggacatc gggacttgcc
241 ctttcctcgg cgcagcggag ctggggcgtc gccgactcag aaggtgcttt ccgagacctc
301 cagggatctc cgaggcgagg aaacccgggc cccggacaga ccgaccctgg gctgaagctc
361 agggccctgt ctgctctgtg gactcaacag tttgtggcaa gacaagctca gaactgagaa
421 gctgtcacca cagttctgga ggctgggaag ttcaagatca aagtgccagc agattcagtg
481 tcatgtgagg acgtgcttcc tgcttcatag ataagagtag cttggagctc ggcggcacaa
541 ccagcaccat ctggtcgcga tggtggacac ggaaagccca ctctgccccc tctccccact
601 cgaggccggc gatctagaga gcccgttatc tgaagagttc ctgcaagaaa tgggaaacat
661 ccaagagatt tcgcaatcca tcggcgagga tagttctgga agctttggct ttacggaata
721 ccagtattta ggaagctgtc ctggctcaga tggctcggtc atcacggaca cgctttcacc
781 agcttcgagc ccctcctcgg tgacttatcc tgtggtcccc ggcagcgtgg acgagtctcc
841 cagtggagca ttgaacatcg aatgtagaat ctgcggggac aaagcctcag gctatcatta
901 cggagtccac gcgtgtgaag gctgcaaggg cttctttcgg cgaacgattc gactcaagct
961 ggtgtatgac aagtgcgacc gcagctgcaa gatccagaaa aagaacagaa acaaatgcca
1021 gtattgtcga tttcacaagt gcctttctgt cgggatgtca cacaacgcga ttcgttttgg
1081 acgaatgcca agatctgaga aagcaaaact gaaagcagaa attcttacct gtgaacatga
1141 catagaagat tctgaaactg cagatctcaa atctctggcc aagagaatct acgaggccta
1201 cttgaagaac ttcaacatga acaaggtcaa agcccgggtc atcctctcag gaaaggccag
1261 taacaatcca ccttttgtca tacatgatat ggagacactg tgtatggctg agaagacgct
1321 ggtggccaag ctggtggcca atggcatcca gaacaaggag gcggaggtcc gcatctttca
1381 ctgctgccag tgcacgtcag tggagaccgt cacggagctc acggaattcg ccaaggccat
1441 cccaggcttc gcaaacttgg acctgaacga tcaagtgaca ttgctaaaat acggagttta
1501 tgaggccata ttcgccatgc tgtcttctgt gatgaacaaa gacgggatgc tggtagcgta
1561 tggaaatggg tttataactc gtgaattcct aaaaagccta aggaaaccgt tctgtgatat
1621 catggaaccc aagtttgatt ttgccatgaa gttcaatgca ctggaactgg atgacagtga
1681 tatctccctt tttgtggctg ctatcatttg ctgtggagat cgtcctggcc ttctaaacgt
1741 aggacacatt gaaaaaatgc aggagggtat tgtacatgtg ctcagactcc acctgcagag
1801 caaccacccg gacgatatct ttctcttccc aaaacttctt caaaaaatgg cagacctccg
1861 gcagctggtg acggagcatg cgcagctggt gcagatcatc aagaagacgg agtcggatgc
1921 tgcgctgcac ccgctactgc aggagatcta cagggacatg tactgagttc cttcagatca
1981 gccacacctt ttccaggagt tctgaagctg acagcactac aaaggagacg ggggagcagc
2041 acgattttgc acaaatatcc accactttaa ccttagagct tggacagtct gagctgtagg
2101 taaccggcat attattccat atctttgttt taaccagtac ttctaagagc atagaactca
2161 aatgctgggg gtaggtggct aatctcagga ctgggaagat tacggcgaat tatgctcaat
2221 ggtctgattt taactcaccc gatgttaatc aatgcacatt gctttagatc acattcgtga
2281 tttaccattt aattaactgg taacctcaaa attcgtggcc tgtcttc
//