LOCUS AK289803 4180 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77527 complete cds, highly similar to Homo
sapiens membrane associated guanylate kinase, WW and PDZ domain
containing 1 (MAGI1), transcript variant 2, mRNA.
ACCESSION AK289803
VERSION AK289803.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4180)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4180
/clone="BRAWH3030704"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000422600"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 96..3866
/codon_start=1
/note="highly similar to Homo sapiens membrane associated
guanylate kinase, WW and PDZ domain containing 1 (MAGI1),
transcript variant 2, mRNA"
/protein_id="BAF82492.1"
/transl_table=1
/translation="MSKVIQKKNHWTSRVHECTVKRGPQGELGVTVLGGAEHGEFPYV
GAVAAVEAAGLPGGGEGPRLGEGELLLEVQGVRVSGLPRYDVLGVIDSCKEAVTFKAV
RQGGRLNKDLRHFLNQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYN
FLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPSQPVSGKVITTDALHSLQSGSKQST
PKRTKSYNDMQNAGIVHAENEEEDDVPEMNSSFTADSGEQEEHTLQETALPPVNSSII
AAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCL
NKQQKPLEECEDDEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVL
EAKRKKQLEQQQQQQQQQQQQQQQQQQQQTEEWTEHHSALVPPVIPNHPPSNPEPARE
VPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAA
LDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPN
TSLVTSVAILDKEPIIVNGQETYDSPASHSSKTGKVNGMKDARPSSPADVASNSSHGY
PNDTVSLASSIATQPELITVHIVKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKE
GDLIVEVNKKNVQALTHNQVVDMLVECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKD
SQNSSQHSVSSHRSLHTASPSHSTQVLPEFPPAEAQAPDQTDSSGQKKPDPFKIWAQS
RSMYENRPMSPSPASGLSKGEREREINSTNFGECPIPDYQEQDIFLWRKETGFGFRIL
GGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQ
GHVNLTVRRKVVFAVPKTENEVPSPASSHHSSNQPASLTEEKRTPQGSQNSLNTVSSG
SGSTSGIGSGGGGGSGVVSTVVQPYDVETRRGENEGFGFVIVSSVSRPEAGTTFAGNA
CVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTL
RIIPGDESSNATLLTNAEKIATITTTHTPSQQGTQETRNTTKPKQESQFEFKAPQATQ
EQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEING
ETTKNMKHSRAIELIKNGGRRVRLFLKRGDGSVPEYGGSNYENIPSFPGMTP"
BASE COUNT 1129 a 1027 c 1137 g 887 t
ORIGIN
1 tgtttctccc atgaacaagc ggaggcttgg gggctcgtgc tgtggggggc acctgtctct
61 cgttttattt ttttggagga ggggtgtaac tcatcatgtc caaagtgatc cagaagaaga
121 accactggac tagcagggtt cacgaatgca ccgtgaagcg gggaccccag ggcgagctgg
181 gggtgacggt gctgggaggc gcggagcacg gggagtttcc gtacgtcgga gcggtggcgg
241 cggtcgaggc agcggggctt cccggcggcg gcgagggccc gaggctgggc gaaggggagc
301 tgcttctgga ggtgcagggg gtccgggtgt ccggcttgcc ccgctatgac gtgctggggg
361 tcatcgacag ctgcaaggag gccgtcacct tcaaggccgt cagacaagga ggaaggctga
421 acaaggacct gcgacatttt ctcaatcagc gattccagaa ggggtctcct gatcatgagc
481 tccagcagac cataagggat aacctttacc gccatgctgt gccttgcaca acccgatctc
541 ccagagaagg agaagtgcct ggcgtggact ataactttct gactgtgaag gagttcttgg
601 acctcgagca gagtgggact cttctggaag tcggcaccta tgaaggaaac tattatggga
661 cacccaagcc tcctagccag ccagtcagtg ggaaagtgat cacgacggat gccttgcaca
721 gccttcagtc tggctctaag cagtcgaccc cgaagcgaac caagtcctac aatgatatgc
781 aaaatgctgg catagtccac gcggagaatg aggaggagga tgacgttcct gaaatgaaca
841 gcagctttac agccgattct ggtgaacaag aggagcacac tctccaagaa acagcattac
901 cacctgtgaa tagtagcatc atcgctgctc ccatcacgga cccttctcag aagttccctc
961 aatacctacc tctttctgca gaggataatt taggtcctct acctgaaaac tgggagatgg
1021 cctatactga aaatggagaa gtctatttta tagaccataa cacgaaaaca acatcttggt
1081 tagaccctcg gtgcctaaac aagcagcaga agccactgga agagtgtgaa gatgatgaag
1141 gggtacacac cgaggagctg gacagtgaac tagaactgcc tgctggttgg gaaaagattg
1201 aagaccctgt ctatggtatc tactatgtag accacatcaa caggaagaca caatatgaga
1261 acccggttct agaagccaaa cggaagaagc agcttgagca gcagcagcag cagcaacagc
1321 agcagcaaca gcagcagcag cagcagcagc agcagcagac agaagaatgg acagaacatc
1381 actcagccct tgtgcctcct gttattccaa accaccctcc aagcaatcca gagccagcca
1441 gagaagttcc acttcagggc aaaccctttt ttacacgaaa cccttctgag ttgaaaggca
1501 agttcattca cacaaagctg cggaaaagca gtcgtggctt tggcttcacg gtggttggag
1561 gggatgaacc tgatgagttt ctccagatca agagcttggt cctagatggt cctgctgcat
1621 tggatggcaa gatggaaaca ggggatgtga ttgtaagtgt gaatgacacc tgtgttttgg
1681 gacacacaca tgctcaagtt gtgaagatct tccagtccat ccccattggt gccagcgtgg
1741 accttgaact ctgccgaggt tatccattgc cttttgatcc agatgacccc aatacaagtt
1801 tagtgacctc ggtagccatt ttggataaag aaccaattat tgtgaatggg caagagacct
1861 atgattcacc agctagccac agtagtaaaa caggcaaagt caatggcatg aaggatgcca
1921 ggccaagcag cccagcggac gtggcttcaa atagttctca tggttatcct aatgacactg
1981 tttctttggc ttcctccata gccactcagc cagaactcat aactgttcat attgtcaaag
2041 ggccaatggg ctttggtttt actatcgcag acagtcctgg tgggggtggc caaagagtga
2101 aacagattgt tgacagccca aggtgccgag gcctgaaaga aggggatctc atagtggaag
2161 ttaataagaa gaacgtgcag gccctaactc acaaccaagt ggtggatatg ctggttgagt
2221 gtcctaaggg aagtgaggtc acattgttgg tgcaacgagg agggctgcca gttcccaaga
2281 agagcccaaa gtcgcaacca ctggaaagga aagacagcca gaatagttct cagcacagtg
2341 tttccagcca ccgaagcctg cacacagcat ccccaagcca cagcacacag gtgctccccg
2401 agttcccacc tgcagaggcc caagctccag atcaaactga cagctctggc cagaaaaaac
2461 cagatccttt taaaatctgg gcccagtcca ggagcatgta tgaaaaccga cctatgtcac
2521 cttcacctgc gtcgggattg agcaagggtg agagagagag agaaatcaat tccacgaatt
2581 ttggagaatg tccgattcca gattaccagg aacaggacat cttcctctgg agaaaagaga
2641 ctggatttgg atttaggatt ctgggtggaa atgaaccagg ggaacctatt tatattggtc
2701 acatcgtacc actgggtgct gctgatactg acggccgcct gaggtctgga gatgaattaa
2761 tctgtgtgga tgggacgcca gtaattggaa aatcacacca gcttgtggtc cagcttatgc
2821 aacaagctgc caagcaaggc cacgtcaatc tcacggtgcg gcgtaaagtg gtttttgcgg
2881 tgcccaaaac cgagaacgag gtgccctcgc cagcctcctc tcatcacagt agcaaccagc
2941 cggcctcgct gacagaagag aagcgcactc cgcagggcag ccagaactcg ctgaacacgg
3001 tgagctcggg cagcggcagc accagcggca tcggcagtgg cggcggcggg ggcagcggcg
3061 tggtcagcac cgtggtgcag ccctacgacg tggagacccg gcgcggggag aacgagggct
3121 tcggcttcgt catcgtgtcc tcggtgagca ggcccgaagc aggcacgacc tttgcaggca
3181 atgcatgtgt ggctatgcct cacaaaatag gtcggattat tgaggggagc cctgctgacc
3241 gctgtggcaa gctgaaagta ggagaccgga tcttggcagt aaatggatgt tccatcacca
3301 acaaatccca ttcagacatt gtgaacctaa tcaaggaagc gggaaacaca gttaccctcc
3361 gcatcattcc tggggatgag tcctcgaatg ccaccttgct gaccaatgca gagaagattg
3421 ccaccatcac caccacacac accccttctc agcaagggac ccaggagaca aggaatacca
3481 ccaaaccaaa gcaggaatct caatttgagt tcaaagcacc ccaagcaaca caggagcaag
3541 atttttacac tgtggaactg gaaagaggag ccaagggatt tggctttagc cttcgaggag
3601 gccgagagta taacatggac ctctatgttc tgcgcttagc agaggacggt cctgcggaga
3661 ggtgtggaaa gatgaggatt ggtgatgaaa ttttagagat caatggtgag accaccaaaa
3721 acatgaagca ttctcgagct atagaactga ttaagaatgg tggccgcaga gttcgtctgt
3781 ttctgaagcg gggagacggc tcagtaccag aatatggtgg gtcaaactat gaaaacattc
3841 cttccttccc tggcatgact ccatgaattt gtctccagaa cggcagcagg aaagtctttt
3901 ttgtttcccc tattcaccag tgtcttacca gcctctcgca ccatgtgatt atttgcctcg
3961 cttgttctga aatctctaca catttcatcc ttttgcttgc ttacgtggac tggggcatgg
4021 cctaagacaa gatctttata gccccctttc tgataatcag agagaacgtt ttgtctagtc
4081 cgaccaagag cgaaggaatg tttgtttgta ctgtgccaaa ctgttcctca gatccaattg
4141 ttagcacaaa atgactatat actcctttta agaagcagga
//