LOCUS AK289768 1860 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76217 complete cds, highly similar to Homo
sapiens E2a-Pbx1-associated protein (EB-1), transcript variant 2,
mRNA.
ACCESSION AK289768
VERSION AK289768.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1860)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1860
/clone="BRAWH3017324"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000422565"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 273..1805
/codon_start=1
/note="highly similar to Homo sapiens E2a-Pbx1-associated
protein (EB-1), transcript variant 2, mRNA"
/protein_id="BAF82457.1"
/transl_table=1
/translation="MMWQCHLSAQDYRYYPVDGYSLLKRFPLHPLTGPRCPVLTVGQW
LESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKM
RPIGHDGYHPTSVAEWLDSIELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIG
HRKRILASLGDRLHDDPPQKPPRSITLREPSGNHTPPQLSPSLSQSTYTTGGSLDVPH
IIMQGDARRRRNENYFDDIPRSKLERQMAQSSVCEIWTNQNAGFPFSAIHQVHNTGDW
GEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDA
CAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDPED
LSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARKGGHSST
LPESFENKPSKPIPKPRVSIRKSVQIDPSEQKTLANLPWIVEPGQEAKRGINTKYETT
IF"
BASE COUNT 518 a 474 c 404 g 464 t
ORIGIN
1 attgctcatt gtggagtact ccaacaatca catagaacgc agaccagccc aagctgacag
61 cttgatatgc cttcttctgc tgcctggttt tgggggctgt atgacgtact ggtcggtagt
121 aaagattaat atgtaagaaa tgtggagcta ggatcaagtc atactccaca gcctgcctgg
181 caaactatgt tttacttctg actttgctct ctcgctgaga acattaatct gtcaagctgg
241 cgggctcctt tgatagcaac tttcccaggg gcatgatgtg gcaatgccac ctctcagccc
301 aggactaccg ctattacccc gtggacggct actccctgct taaacgcttc cctcttcatc
361 ctcttacagg acccagatgc cctgtcctaa cagtgggaca atggttggaa agcattgggc
421 tacctcagta cgagaaccac ctgatggcta atggatttga caatgtgcag tttatgggaa
481 gcaatgttat ggaagatcag gatttgttgg aaattggaat ccttaattct gggcacagac
541 aaagaattct acaggcaatc cagctccttc caaagatgag acccattggg catgatggct
601 accatcccac ctctgtagct gagtggctgg attccattga actgggcgac tacaccaaag
661 cctttctaat taatggctac acttcgatgg acctgttgaa aaaaatctgg gaggttgaac
721 ttattaatgt tttaaaaatc aatttgattg gccacaggaa acgtattttg gcatctctgg
781 gagacaggct gcacgacgat cccccacaga agccccctcg gtccatcacc ctcagggaac
841 ccagtggtaa tcacactcct cctcagttgt ctccatcact tagccaaagc acttacacca
901 ctggtggctc cctagacgtt cctcacatta tcatgcaggg cgatgcaagg aggagaagaa
961 atgaaaacta ctttgatgat attccccgat caaaactgga gaggcagatg gctcagtcgt
1021 ctgtctgtga aatatggacg aatcagaacg caggatttcc tttctcagcg atccatcagg
1081 ttcataatac aggagactgg ggagaacctt ccattacctt gcgacctccg aatgaagcca
1141 cagcctctac cccggtacag tactggcagc atcacccaga aaagcttatc ttccagtcgt
1201 gtgattacaa agctttttat ttaggttcta tgctgataaa agaacttagg gggacagaat
1261 caacccaaga tgcttgtgca aaaatgcggg ctaactgtca gaagtctaca gagcaaatga
1321 agaaggtccc tactattatt ctttctgtct catataaagg agtcaaattt attgatgcaa
1381 caaataagaa cataattgct gagcatgaaa ttcgtaatat ctcctgtgct gcccaggacc
1441 cagaagacct ctcaacattt gcctatatca caaaagattt gaagtctaat caccactact
1501 gtcatgtgtt tactgccttt gatgtgaatt tagcctatga aatcatccta accctgggac
1561 aggcattcga agtcgcttac cagctagcac tacaagcaag aaaaggggga cactcctcca
1621 cacttccaga aagctttgaa aacaaaccct ccaaacccat ccccaagccc cgcgttagca
1681 ttcgcaagtc cgtgcagatc gacccatctg agcaaaagac tctggccaat ctaccgtgga
1741 ttgtggagcc gggccaagaa gccaagaggg gcattaatac caagtatgaa accacgattt
1801 tctgatactc gccgtcctcc tgtcctcgcg gtgccttgct cgccaagcgg tcccggagca
//