LOCUS AK289729 2105 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77009 complete cds, highly similar to Homo
sapiens calcium channel, voltage-dependent, beta 1 subunit
(CACNB1), transcript variant 1, mRNA.
ACCESSION AK289729
VERSION AK289729.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2105)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2105
/clone="BRAWH3003440"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000422526"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 175..1971
/codon_start=1
/note="highly similar to Homo sapiens calcium channel,
voltage-dependent, beta 1 subunit (CACNB1), transcript
variant 1, mRNA"
/protein_id="BAF82418.1"
/transl_table=1
/translation="MVQKTSMSRGPYPPSQEIPMEVFDPSPQGKYSKRKGRFKRSDGS
TSSDTTSNSFVRQGSAESYTSRPSDSDVSLEEDREALRKEAERQALAQLEKAKTKPVA
FAVRTNVGYNPSPGDEVPVQGVAITFEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIP
SPVKLDSLRLLQEQKLRQNRLGSSKSGDNSSSSLGDVVTGTRRPTPPASAKQKQKSTE
HVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITRVTADISLA
KRSVLNNPSKHIIIERSNTRSSLAEVQSEIERIFELARTLQLVALDADTINHPAQLSK
TSLAPIIVYIKITSPKVLQRLIKSRGKSQSKHLNVQIAASEKLAQCPPEMFDIILDEN
QLEDACEHLAEYLEAYWKATHPPSSTPPNPLLNRTMATAALAASPAPVSNLQGPYLAS
GDQPLERATGEHASMHEYPGELGQPPGLYPSSHPPGRAGTLRALSRQDTFDADTPGSR
NSAYTELGDSCVDMETDPSEGPGLGDPAGGGTPPARQGSWEDEEEDYEEELTDNRNRG
RNKARYCAEGGGPVLGRNKNELEGWGRGVYIR"
BASE COUNT 473 a 648 c 638 g 346 t
ORIGIN
1 agtggagaga gcgggaggag cgagggaagg caggaaggag gcagccgaag gccgagctgg
61 gtggctggac cgggtgctgg ctgcgccgcg ctgctttcgg ctcccacggc ctctcccatg
121 cgctgaggga gcccggctgg gccgggccgg cggcgggagg ggaggctcct ctccatggtc
181 cagaagacca gcatgtcccg gggcccttac ccaccctccc aggagatccc catggaggtc
241 ttcgacccca gcccgcaggg caaatacagc aagaggaaag ggcgattcaa acggtcagat
301 gggagcacgt cctcggatac cacatccaac agctttgtcc gccagggctc agcggagtcc
361 tacaccagcc gtccatcaga ctctgatgta tctctggagg aggaccggga agccttaagg
421 aaggaagcag agcgccaggc attagcgcag ctcgagaagg ccaagaccaa gccagtggca
481 tttgctgtgc ggacaaatgt tggctacaat ccgtctccag gggatgaggt gcctgtgcag
541 ggagtggcca tcaccttcga gcccaaagac ttcctgcaca tcaaggagaa atacaataat
601 gactggtgga tcgggcggct ggtgaaggag ggctgtgagg ttggcttcat tcccagcccc
661 gtcaaactgg acagccttcg cctgctgcag gaacagaagc tgcgccagaa ccgcctcggc
721 tccagcaaat caggcgataa ctccagttcc agtctgggag atgtggtgac tggcacccgc
781 cgccccacac cccctgccag tgccaaacag aagcagaagt cgacagagca tgtgcccccc
841 tatgacgtgg tgccttccat gaggcccatc atcctggtgg gaccgtcgct caagggctac
901 gaggttacag acatgatgca gaaagcttta tttgacttct tgaagcatcg gtttgatggc
961 aggatctcca tcactcgtgt gacggcagat atttccctgg ctaagcgctc agttctcaac
1021 aaccccagca aacacatcat cattgagcgc tccaacacac gctccagcct ggctgaggtg
1081 cagagtgaaa tcgagcgaat cttcgagctg gcccggaccc ttcagttggt cgctctggat
1141 gctgacacca tcaatcaccc agcccagctg tccaagacct cgctggcccc catcattgtt
1201 tacatcaaga tcacctctcc caaggtactt caaaggctca tcaagtcccg aggaaagtct
1261 cagtccaaac acctcaatgt ccaaatagcg gcctcggaaa agctggcaca gtgcccccct
1321 gaaatgtttg acatcatcct ggatgagaac caattggagg atgcctgcga gcatctggcg
1381 gagtacttgg aagcctattg gaaggccaca cacccgccca gcagcacgcc acccaatccg
1441 ctgctgaacc gcaccatggc taccgcagcc ctggctgcca gccctgcccc tgtctccaac
1501 ctccagggac cctaccttgc ttccggggac cagccactgg aacgggccac cggggagcac
1561 gccagcatgc acgagtaccc aggggagctg ggccagcccc caggccttta ccccagcagc
1621 cacccaccag gccgggcagg cacgctacgg gcactgtccc gccaagacac ttttgatgcc
1681 gacacccccg gcagccgaaa ctctgcctac acggagctgg gagactcatg tgtggacatg
1741 gagactgacc cctcagaggg gccagggctt ggagaccctg cagggggcgg cacgccccca
1801 gcccgacagg gatcctggga ggacgaggaa gaagactatg aggaagagct gaccgacaac
1861 cggaaccggg gccggaataa ggcccgctac tgcgctgagg gtgggggtcc agttttgggg
1921 cgcaacaaga atgagctgga gggctgggga cgaggcgtct acattcgctg agaggcaggg
1981 gccacacggc gggaggaagg gctctgagcc caggggaggg gagggagcga ggggctcaca
2041 cctgacatgt attcgcctcc agggggcgct gtctccctcc tttcagatgc ctttgctcaa
2101 agctt
//