LOCUS AK289709 2175 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75579 complete cds, highly similar to Homo
sapiens calcium channel, voltage-dependent, beta 3 subunit
(CACNB3), mRNA.
ACCESSION AK289709
VERSION AK289709.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2175)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2175
/clone="BRAWH2004785"
/clone_lib="BRAWH2"
/db_xref="H-InvDB:HIT000422506"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 127..1581
/codon_start=1
/note="highly similar to Homo sapiens calcium channel,
voltage-dependent, beta 3 subunit (CACNB3), mRNA"
/protein_id="BAF82398.1"
/transl_table=1
/translation="MYDDSYVPGFEDSEAGSADSYTSRPSLDSDVSLEEDRESARREV
ESQAQQQLERAKHKPVAFAVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSND
WWIGRLVKEGGDIAFIPSPQRLESIRLKQEQKARRSGNPSSLSDIGNRRSPPPSLAKQ
KQKQAEHVPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITRVT
ADLSLAKRSVLNNPGKRTIIERSSARSSIAEVQSEIERIFELAKSLQLVVLDADTINH
PAQLAKTSLAPIIVFVKVSSPKVLQRLIRSRGKSQMKHLTVQMMAYDKLVQCPPESFD
VILDENQLEDACEHLAEYLEVYWRATHHPAPGPGLLGPPSAIPGLQNQQLLGERGEEH
SPLERDSLMPSDEASESSRQAWTGSSQRSSRHLEEDYADAYQDLYQPHRQHTSGLPSA
NGHDPQDRLLAQDSEHNHSDRNWQRNRPWPKDSY"
BASE COUNT 462 a 713 c 621 g 379 t
ORIGIN
1 ccctgccgcc gcccgcaggg ctgcggggct cggtggcatc tcccgggcgc ggcccgcagt
61 ccttgcccct gcctccgggc cgctcccgcc cccggcgccg ctcgctcccc cgacccggac
121 tcccccatgt atgacgactc ctacgtgccc gggtttgagg actcggaggc gggttcagcc
181 gactcctaca ccagccgccc atctctggac tcagacgtct ccctggagga ggaccgggag
241 agtgcccggc gtgaagtaga gagccaggct cagcagcagc tcgaaagggc caagcacaaa
301 cctgtggcat ttgcggtgag gaccaatgtc agctactgtg gcgtactgga tgaggagtgc
361 ccagtccagg gctctggagt caactttgag gccaaagatt ttctgcacat taaagagaag
421 tacagcaatg actggtggat cgggcggcta gtgaaagagg gcggggacat cgccttcatc
481 cccagccccc agcgcctgga gagcatccgg ctcaaacagg agcagaaggc caggagatct
541 gggaaccctt ccagcctgag tgacattggc aaccgacgct cccctccgcc atctctagcc
601 aagcagaagc aaaagcaggc ggaacatgtt cccccatatg acgtggtgcc ctccatgcgg
661 cctgtggtgc tggtgggacc ctctctgaaa ggttatgagg tcacagacat gatgcagaag
721 gctctcttcg acttcctcaa acacagattt gatggcagga tctccatcac ccgagtcaca
781 gccgacctct ccctggcaaa gcgatctgtg ctcaacaatc cgggcaagag gaccatcatt
841 gagcgctcct ctgcccgctc cagcattgcg gaagtgcaga gtgagatcga gcgcatattt
901 gagctggcca aatccctgca gctagtagtg ttggacgctg acaccatcaa ccacccagca
961 cagctggcca agacctcgct ggcccccatc atcgtctttg tcaaagtgtc ctcaccaaag
1021 gtactccagc gtctcattcg ctcccggggg aagtcacaga tgaagcacct gaccgtacag
1081 atgatggcat atgataagct ggttcagtgc ccaccggagt catttgatgt gattctggat
1141 gagaaccagc tggaggatgc ctgtgagcac ctggctgagt acctggaggt ttactggcgg
1201 gccacgcacc acccagcccc tggccccgga cttctgggtc ctcccagtgc catccccgga
1261 cttcagaacc agcagctgct gggggagcgt ggcgaggagc actcccccct tgagcgggac
1321 agcttgatgc cctctgatga ggccagcgag agctcccgcc aagcctggac aggatcttca
1381 cagcgtagct cccgccacct ggaggaggac tatgcagatg cctaccagga cctgtaccag
1441 cctcaccgcc aacacacctc ggggctgcct agtgctaacg ggcatgaccc ccaagaccgg
1501 cttctagccc aggactcaga gcacaaccac agtgaccgga actggcagcg caaccggcct
1561 tggcccaagg atagctactg acagcctcct gctgccctac cctggcaggc acaggcgcag
1621 ctggctgggg ggcccactcc aggcagggtg gcgttagact ggcatcaggc tggcactagg
1681 ctcagccccc aaaaccccct gcccagcccc agcttcaggg ctgcctgtgg tcccaaggtt
1741 ctgggagaaa caggggaccc cctcacctcc tgggcagtga cccctactag gctcccattc
1801 caggtactag ctgtgtgttc tgcacccctg gcaccttcct ctcctcccac acaggaagct
1861 gccccactgg gcagtgccct caggccagga tccccttagc agggtccttc ccaccagact
1921 cagggaaggg atgccccatt aaagtgacaa aagggtgggg tgtgggcacc atggcatgag
1981 gaagaaacaa ggtccctgag caggcacaag tcctgacagt caagggactg ctttggcatc
2041 cagggcctcc agtcacctca ctgccataca ttagaaatga gacaatcaaa gcccccccag
2101 ggtggcacac ccatctgttt gctggggtgt ggcagccaca tccaagactg gagcagcagg
2161 ctggccacgc tcggg
//