LOCUS AK289692 2788 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ75103 complete cds, highly similar to Homo sapiens protein tyrosine phosphatase domain containing 1 (PTPDC1), transcript variant 1, mRNA. ACCESSION AK289692 VERSION AK289692.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2788) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2788 /clone="BRAMY4000827" /clone_lib="BRAMY4" /db_xref="H-InvDB:HIT000422489" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="amygdala" CDS 54..2480 /codon_start=1 /note="highly similar to Homo sapiens protein tyrosine phosphatase domain containing 1 (PTPDC1), transcript variant 1, mRNA" /protein_id="BAF82381.1" /transl_table=1 /translation="MQVQDATRRPSAVRFLSSFLQGRRHSTSDPVLRLQQARRGSGLG SGSATKLLSSSSLQVMVAVSSVSHAEGNPTFPERKSKGNLERPTPKYTKVGERLRHVI PGHMACSMACGGRACKYENPARWSEQEQAIKGVYSSWVTDNILPMARPSSELLEKYHI IDQFLSHGIKTIINLQRPGEHASCGNPLEQESGFTYLPEAFMEAGIYFYNFGWKDYGV ASLTTILDMVKVMTFALQEGKVAIHCHAGRGRTGVLIACYLVFATRMTADQAIIFVRA KRPNSIQTRGQLLCVREFTQFLTPLRNIFSCCDPKAHAVTLPQYLIRQRHLLHGYEAR LLKHVPKIIHLVCKLLLDLAENRPVMMKDVSEGPGLSAEIEKTMSEMVTMQLDKELLR HDSDVSNPPNPTAVAADFDNRGMIFSNEQQFDPLWKRRNVECLQPLTHLKRRLSYSDS DLKRAENLLEQGETPQTVPAQILVGHKPRQQKLISHCYIPQSPEPDLHKEALVRSTLS FWSQSKFGGLEGLKDNGSPIFHGRIIPKEAQQSGAFSADVSGSHSPGEPVSPSFANVH KDPNPAHQQVSHCQCKTHGVGSPGSVRQNSRTPRSPLDCGSSPKAQFLVEHETQDSKD LSEAASHSALQSELSAEARRILAAKALANLNESVEKEELKRKVEMWQKELNSRDGAWE RICGERDPFILCSLMWSWVEQLKEPVITKEDVDMLVDRRADAAEALFLLEKGQHQTIL CVLHCIVNLQTIPVDVEEAFLAHAIKAFTKVNFDSENGPTVYNTLKKIFKHTLEEKRK MTKDGPKPGL" BASE COUNT 754 a 649 c 670 g 715 t ORIGIN 1 actgagtgag tggggctgac tcttcctgcc tccggctctt gcctcccagt gccatgcagg 61 tgcaggatgc aaccaggcgg ccctcagccg tgcgcttcct cagctccttt ctccagggcc 121 gccggcactc cacctcagac ccagtactgc ggctgcagca ggcccggcgg ggctctggct 181 tgggctccgg ctctgccacg aagctgctgt cctcgtcctc tctccaggtg atggtggctg 241 tttcctcagt cagccatgca gagggaaacc caactttccc cgaaagaaaa agtaaaggaa 301 atttagaacg tccaacacca aagtacacaa aagtagggga gcgtttacgg catgtcattc 361 ctggacacat ggcatgttcc atggcgtgtg gcggtagagc ttgcaagtat gagaacccag 421 cccgctggag tgagcaggag caagccatta agggggttta ctcatcctgg gtcactgata 481 atatactgcc catggcccgc ccatcctctg agctcctgga gaagtaccac atcattgatc 541 agttcctcag ccatggcata aaaacaataa tcaacctcca gcgccctggt gagcatgcta 601 gctgtgggaa ccctctggaa caagaaagtg gcttcacata ccttcctgag gctttcatgg 661 aggctggcat ttacttctac aatttcggat ggaaggatta tggtgtagcg tctcttacta 721 ctatcctaga tatggtgaag gtgatgacat ttgccttaca ggaaggaaaa gtagctatcc 781 attgtcatgc agggcgtggt cgaacaggtg ttttaatagc ctgttactta gtttttgcaa 841 cgagaatgac tgctgaccaa gcaattatat ttgtgcgggc aaagcgaccc aattccatac 901 aaaccagagg acagctcctc tgtgtaaggg aatttactca gtttctaact cctctccgca 961 atatattctc ttgctgtgat cccaaagcac atgctgtcac cttacctcaa tatctaattc 1021 gccagcgtca tctgcttcat ggttatgagg cacgacttct gaaacacgtg ccaaaaatta 1081 tccacctagt ttgcaaattg ctgctggact tagcggagaa caggccagtg atgatgaagg 1141 atgtgtccga aggacctggt ctctctgctg aaatagaaaa gacaatgtct gagatggtca 1201 ccatgcagct ggataaagag ttactgaggc atgacagtga tgtgtccaac ccgcctaacc 1261 ccactgcagt ggcagcagat tttgacaatc gaggcatgat tttctccaat gagcaacagt 1321 ttgaccctct ttggaaaagg cggaatgttg agtgccttca acccctgact catctgaaaa 1381 ggcggctcag ctacagtgac tcagatttaa agagggccga gaacctcctg gagcaagggg 1441 agactccaca gacagtgcct gcccagatct tggttggcca caagcccagg cagcagaagc 1501 tcataagcca ttgttacatc ccacagtctc cagaaccaga cttacacaag gaagccttgg 1561 ttcgcagcac actttctttc tggagtcagt caaagtttgg aggcctggaa ggactcaaag 1621 ataatgggtc accaattttc catggaagga tcattccaaa ggaagcacag cagagtggag 1681 ctttctctgc agatgtttca ggctcacaca gccctgggga gccagtttca cccagctttg 1741 caaatgtcca taaggatcca aaccctgctc accagcaagt gtctcactgt cagtgtaaaa 1801 ctcatggtgt tgggagccct ggctctgtca ggcagaacag caggacaccc cgaagccctc 1861 tggactgtgg ctccagtccc aaagcacagt tcttggttga acatgaaacc caggacagta 1921 aagatctgtc tgaagcagct tcacactctg cattacagtc tgaattgagt gctgaggcaa 1981 gaagaatact ggcggccaaa gccctagcaa atttaaatga atctgtagaa aaggaggaac 2041 taaaaaggaa ggtagaaatg tggcagaaag agcttaattc ccgagatgga gcttgggaaa 2101 gaatatgtgg cgagagggac cctttcatcc tatgcagctt gatgtggtct tgggtggagc 2161 aactgaagga gcctgtaatc accaaagagg atgtggacat gttggttgac aggcgagcag 2221 atgccgcaga agcacttttt ttattagaga agggacagca ccagactatt ctctgcgtgt 2281 tgcactgcat agtgaacctg cagacaattc ccgtggatgt ggaggaagct ttccttgccc 2341 atgccattaa ggcattcact aaggttaatt ttgattctga aaatggacca acagtttaca 2401 acaccctgaa gaaaatattt aagcacacgc tggaagaaaa aagaaaaatg acaaaagatg 2461 gccctaagcc tggcctctag ctttcactcg tggtgaatat ttcagaccta aagatccaga 2521 tagtatctct gttcatatgt gaataagttg aagattgtgg ggctactttt tctcatagca 2581 ctttattttg aatgttgtta gtttgtgctg agaatggtcg tccgtatttg aaccaattat 2641 ttattttaaa atatatttaa gctacatttt tgttttgaaa aattgccata aatttggtgc 2701 cactttcttt tatttatttg actgagttaa tattattgta ttaacatttt aagtatatgg 2761 tgtttacatt cttatttctt ttgacatt //