LOCUS AK289689 4609 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78637 complete cds.
ACCESSION AK289689
VERSION AK289689.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4609)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4609
/clone="BRAMY3017640"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000422486"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 957..2636
/codon_start=1
/protein_id="BAF82378.1"
/transl_table=1
/translation="MWTNFFKLRLFCCLLAVLMVVVLVINVTQVEYLDHETVSATFID
SSGQFVSSQVTGISRNPYCGYDQQTLSSQERMEEDSLLAALHRQVPDVGPVPFVKSTD
PSSSYFVILNSAAFFKVGSQLEVLVHVQDFQRKPKKYGGDYLQARIHSLKLQAGAVGR
VVDYQNGFYKVFFTLLWPGKVKVSVSLVHPSEGIRVLQRLQEDKPDRVYFKSLFRSGR
ISETTECNVCLPGNLPLCNFTDLYTGEPWFCFKPKKLPCSSRITHFKGGYLKGLLTAA
ESAFFQSGVNIKMPVNSSGPDWVTVIPRRIKETNSLELSQGSGTFPSGYYYKDQWRPR
KFKMRQFNDPDNITECLQRKVVHLFGDSTIRQWFEYLTTFVPDLVEFNLGSPKNVGPF
LAVDQKHNILLKYRCHGPPIRFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFST
FPLEVYIRRLRNIRRAVVRLLDRSPKTVVVIRTANAQELGPEVSLFNSDWYNFQLDTI
LRRMFSGVGVYLVDAWEMTLAHYLPHKLHPDEVIVKNQLDMFLSFVCPLET"
BASE COUNT 1228 a 941 c 1122 g 1318 t
ORIGIN
1 atctgctccc gagtccccag ccccgtgctg ataggtgcag cccctggagt cgtggctgtg
61 ggcataggtg ccagggaggg gaggcccggg tcgaaggcat aggcagaatt ggagccctgg
121 gttgccaaag cgtcgcagct aagaagccgg agcccaggct agtaccggcg gggcggggcg
181 gggcggggcc gggagcgagc atctccatcc tcagtttcct ccacttgcgg caacgccaca
241 gctcggtaca gttcggacct ccacgccgca gcgaaagact tctgtcctcc aggcaccttc
301 actaacccgg tgcggagcac ttggcgacgc ctccctgccc atctcatatc tctcggctca
361 tcgctgctct gggcaccagc tgcctcttgg ctggcgctgc tgtcacacgg tggactgttc
421 tggccttact gagctgccgt ttggggacat cagattcagc aagaagaatt gtatagaaat
481 gtaaacaaca tttatgtgtg cttcacatgt ggcatgaaaa aaatgaggac ctctggtcaa
541 aattgcctga gttcagaatt tcatgctgga aggaaagtta gacgtaactt ctaatttcta
601 gttccagtaa gcatctcttc ttggaaaatt tccaaaaaag agtcctgctc tgttgcccag
661 gctggagtac attggtgtga tgatcatggt tcactgcagc ctcgacctcc caggctcaag
721 caattctcct acctcagcct cctgagtaac tgggactata ggatttcttt gaagaaaaat
781 gtgcttcttg aatcaactgc agtctctcct ctgcataaga gctcttaagg gtactagcag
841 gatagaagca aatgaaactg aaagctcatc tgcagctcag aaaagcaaag acatggaatt
901 ttaaagagtg aaggtagcat ggtgtcggcc atgggtgaac aagacacagc cagacaatgt
961 ggaccaattt cttcaaacta cggcttttct gctgtctgct tgcagtgttg atggtggtgg
1021 tgctggtcat caatgttact caggtagagt acttggacca tgagactgtt tcagccactt
1081 tcatcgacag cagtggacag tttgtttcct cccaggtgac aggaattagc cgaaatccct
1141 actgtggcta tgatcagcag accctgtcca gccaggagcg catggaggag gactccttgc
1201 tggctgcctt gcaccggcag gttcctgatg tgggcccagt cccctttgtg aagagcactg
1261 acccttcttc cagctacttt gtcatcttga actctgctgc cttctttaag gtgggaagcc
1321 agcttgaggt gctggttcat gtgcaggatt ttcaaagaaa gcccaagaag tatggtggag
1381 actacctgca ggccagaatt cactccctca agctgcaggc tggggctgtg ggcagggtgg
1441 tggattacca gaatgggttt tacaaggttt tctttacttt gctatggcca ggcaaagtta
1501 aagtatccgt atctctggtc caccccagtg aagggatcag agttcttcag cgcttacagg
1561 aagataaacc agacagggtc tatttcaaga gtctcttccg ttcaggaaga atttctgaaa
1621 ctactgagtg caacgtgtgt cttcctggga atctgcccct gtgtaacttt acagacctct
1681 acactgggga gccctggttc tgcttcaaac caaagaagct cccttgcagc agcagaatta
1741 cccatttcaa aggtggatac ctgaaaggtc tcctaaccgc tgcagagagt gctttcttcc
1801 agagtggtgt caatatcaaa atgccagtca actccagtgg acctgattgg gtaactgtga
1861 ttcccaggag aataaaagaa actaacagtc tagaactatc tcaaggctca ggaacttttc
1921 cttctgggta ttattataaa gaccagtgga ggcccagaaa gtttaagatg cgtcagttta
1981 atgaccctga caacattaca gagtgcttac aaagaaaagt ggtgcattta tttggtgact
2041 caacaatcag gcaatggttt gaatacctta ctacatttgt tccagattta gtggagttta
2101 acttgggtag tcccaagaat gtgggtccct tccttgcagt ggaccagaag cacaacatcc
2161 tgctcaaata ccgctgccat ggtccaccca tccgcttcac gactgtcttt agcaatgagc
2221 tccattatgt ggcgaatgag ctgaatggca ttgtgggagg gaagaacaca gtggttgcca
2281 tagctgtatg gtctcacttc agcaccttcc ctttggaagt gtacatccgg cggctcagga
2341 acatccgtcg agcagtggtt cggctcctcg atcgaagccc aaagaccgtg gtggtcatcc
2401 ggacggccaa cgcccaagag ctgggacctg aggtgagcct tttcaacagc gactggtaca
2461 actttcagct ggacaccatc cttcggagga tgttctcagg ggttggagta tatctcgtcg
2521 atgcctggga gatgaccctg gcccattatc taccgcacaa gctgcatcca gatgaagtta
2581 ttgtgaagaa ccagctggac atgttcttgt cctttgtgtg ccccttggaa acctagcctg
2641 tcttggaagg gactggagga atcatattca atgaccttct caattgacct gagttacaga
2701 aagtggcccc agtgagagat gactgccctt aataagtata aaatttcaaa aagatctgga
2761 cttaatatga tgacttataa ggagcttaga aaatgcaggt tacatttata tctacctata
2821 ggattttatc caatgttgac ttagccatgg tagaactctt aactgcatct acacactata
2881 ttgctcttgt aaccaaagat gctaatgagt gtatttgaat tagcttctcc taggaggggt
2941 gactactttg ctaaagagta tgaaaaatgt tttgatggaa gggacaagtt tggttggtag
3001 tagagtgttt gtagcttatc tggtaaagga aattgagtgc atctgcatgc atagcacaag
3061 taatccatct tctggcggtt aactagagaa agcttatagt cagaggctct tgtgaatgca
3121 ctgaagactg ctgtgtctca ggagtttctc ttgatgatct accttttctg aattacttga
3181 aaaggccaat gtgcttggtt cgagtttttt agtgaatatt tacaatttcc tgcttttatc
3241 tagaaaagaa gcaaaaggga aatatgaaag cagtatatat aaaatctgtg ctttggaatt
3301 gatatttgca tttggtgatt gttttttatt tgattcagct aaattttatg tgttgaatac
3361 ttactctaga ataactactt ttggaactgg aagggggaaa tctgtaaatg gaaatttatt
3421 tttatgttct gaaatttgag ggtttaggaa ttgacttttg tgtaaagaat gctacggtat
3481 tataaagctg tggaagtttt ttccactagt ttcaggtgtt tttttttttt ttgttgttgt
3541 tgttattttg aactacttac caaaattaga agttaaaatc taattagaaa ttaataagat
3601 actaaaattc atgacagttt tttgtttgtt tgtttgtttg ttttttggta tttcttgatt
3661 tgggcataaa aggcacaccc attctctcat gcttggaaga agctgctatt cctactggct
3721 atctaagaag aatggaatta ttaattttat ttgacttatt aattttaaac gagtttaatt
3781 tgggatcatt tagtaagtac tcttttcttt ttgagctgtg atagattata gtctagttta
3841 agttgctcct aagtagacag atgaagaaac tagggaggct ttagagagga agacagatgc
3901 ttgaagtatg aacaatatat acccttagaa gaatgggtca aataatttgg gtttttaatt
3961 taaaatagga gggccccaga tcttactttc ctgtccttga ggaacacctt caagttttta
4021 aagtatttta gggggaaaga agatttttaa ttgtttctga gcctaatgag gtaataaaat
4081 atattaaaat agtttaattt taatggtcct tacgctttac agtacctaag gatcacttgt
4141 agtatctgac aaaaatgcag aattaaagag tcatggcagg gtgtggtggc tcaagcctgt
4201 aatcccagca ctttgggagg ccaggcagga ggattgcttg aggccaggag tttgagacca
4261 gcctgggcaa catagtaaga cctcatctct acaaaaaata aaaaattatc caggtgtggg
4321 ccgacagtcc cagctactag ggaggctaag gcagggtgat tgattgagcc cagtagtttg
4381 aggctgcagt gagttatgat tgcgccacta cactcccact tgggcaacag acaagagatc
4441 ttatctctaa aaaatttttg ttaaataata aaagaattaa ggccagggat gttggctcac
4501 atctgtaatc ccagcaggga ttatagtctc gggaggctga ggtgggcgga ttgcttgagc
4561 ccggaaggtc aagaccagcc tgggtgccat ggtgaaaccc catctctac
//