LOCUS AK289688 1827 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77006 complete cds, highly similar to Homo
sapiens collagen-like tail subunit (single strand of homotrimer)
of asymmetric acetylcholinesterase (COLQ), transcript variant I,
mRNA.
ACCESSION AK289688
VERSION AK289688.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1827)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1827
/clone="BRAMY3016804"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000422485"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 146..1513
/codon_start=1
/note="highly similar to Homo sapiens collagen-like tail
subunit (single strand of homotrimer) of asymmetric
acetylcholinesterase (COLQ), transcript variant I, mRNA"
/protein_id="BAF82377.1"
/transl_table=1
/translation="MVVLNPMTLGIYLQLFFLSIVSQPTFINSVLPISAALPSLDQKK
RGGHKACCLLTPPPPPLFPPPFFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPG
PPGPQGPPGLPGKTGPKGEKGELGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGD
LGMMGLPGSRGPMGSKGCPGSRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPK
GEPGIAGHRGPTGRPGKRGKQGQKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIM
GPKGERGFPGPPGRCLCGPTMNVNNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQ
NAIAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPGEECDDGNSD
VGDDCIRCHRAYCGDGHRHEGVEDCDGSDFGYLTCETYLPGSYGDLQCTQYCYIDSTP
CRYFT"
BASE COUNT 441 a 539 c 496 g 351 t
ORIGIN
1 acacacacag acacacacac acacgcacac acacacacac aaacacacgc gcacgcaaac
61 agcagtgagg aagagaaaag cagagataag caaggctccg cagcagcctc ctttctaact
121 tgaccctcgc cagaccctgg ccagcatggt tgtcctgaat ccaatgactt tgggaattta
181 tcttcagctt ttcttcctct ctatcgtgtc tcagccgact ttcatcaaca gcgttcttcc
241 aatctcagca gcccttccca gcctggatca gaagaagcgt ggtggccaca aagcatgctg
301 cctgctgacg cctcctccac caccactgtt cccaccacca ttcttcagag gtggccgaag
361 tccgcttctc tccccagaca tgaagaatct catgctggaa ctggagacct cgcagtcccc
421 gtgcatgcaa ggctcgctag gctcccctgg gcctcccggc ccccagggtc caccggggct
481 tcctggcaag acaggaccaa agggagaaaa gggggagctt ggccgaccag gaaggaaggg
541 tagacctggc cccccaggtg ttcctggcat gcctgggccc atcggttggc caggccctga
601 aggacccagg ggtgaaaaag gtgacctggg tatgatgggc ttgccagggt caagaggacc
661 aatgggctcc aagggctgcc ctggatccag aggggaaaag ggatccagag gtgaaaaggg
721 tgacctgggt cccaaaggag aaaagggttt cccaggattt cctggaatgt tggggcagaa
781 aggtgaaatg ggtccaaaag gtgaacctgg gatagcagga caccgaggac ccacaggaag
841 accaggaaaa cgaggcaagc agggacagaa aggggatagt ggagttatgg gcccaccagg
901 caagcctggg ccttctggtc aacctggccg tccggggccc ccaggccccc cacctgcagg
961 acaacttata atgggaccca aaggggaaag aggatttccc gggcctccag gaagatgtct
1021 ttgtggaccc actatgaatg tgaataaccc ttcctacggg gaatctgtgt atgggcccag
1081 ttccccgcga gttcctgtga tttttgtggt caacaaccag gaggagcttg agaggctgaa
1141 cacccaaaac gccattgcct tccgcagaga ccagagatct ctgtacttca aggacagcct
1201 tggctggctc cccatccagc tgaccccttt ctaccctgtg gattacactg cagaccagca
1261 cggcacctgt ggggatgggc tcctgcagcc tggggaggag tgtgacgacg gtaacagcga
1321 tgtgggtgac gactgcatcc gctgtcaccg tgcctactgt ggagatggtc accggcatga
1381 gggtgtggag gactgtgacg gctctgactt tggctacctg acatgcgaga cctatctccc
1441 tgggtcatat ggagacctgc aatgcaccca gtactgctac atcgactcca cgccctgccg
1501 ctacttcacc tgagggccgt gaggagaagg tgggctgcgc cccacagaac tggcagcagc
1561 ttctccactg tcatcaaact ggccatgtcc tggccccgtc tccaccaacc tttgtgtgac
1621 aaaaacaagg acaaattcct gctactaaga catgctgtta actcagtctg actggaagaa
1681 tttaggacca ctgcatcctg tcttaatcca aggtactgga aaaccttcca catgcccaac
1741 ctgagacctg ttccccatcg ctaccatttg gccaaacaac cggctacaat gctcttcctc
1801 ttctggaatg ttgctgaccc aggccgt
//