LOCUS AK289674 3337 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75453 complete cds, highly similar to Homo
sapiens tripartite motif-containing 37 (TRIM37), transcript
variant 2, mRNA.
ACCESSION AK289674
VERSION AK289674.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3337)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3337
/clone="BRAMY3003526"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000422471"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 276..3170
/codon_start=1
/note="highly similar to Homo sapiens tripartite
motif-containing 37 (TRIM37), transcript variant 2, mRNA"
/protein_id="BAF82363.1"
/transl_table=1
/translation="MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWL
TEQRAQCPHCRAPLQLRELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKL
SVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISL
VQEVERNVEAVRNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELL
ESLLQEVEHQLRSCSKSELISKSSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSY
DSATFVLENFSTLRQRADPVYSPPLQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAG
LPETSKYEYRVEMVHQSCNDPTKNIIREFASDFEVGECWGYNRFFRLDLLANEGYLNP
QNDTVILRFQVRSPTFFQKSRDQHWYITQLEAAQTSYIQQINNLKERLTIELSRTQKS
RDLSPPDNHLSPQNDDALETRAKKSACSDMLLEGGPTTASVREAKEDEEDEEKIQNED
YHHELSDGDLDLDLVYEDEVNQLDGSSSSASSTATSNTEENDIDEETMSGENDVEYNN
MELEEGELMEDAAAAGPAGSSHGYVGSSSRISRRTHLCSAATSSLLDIDPLILIHLLD
LKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQRKQQAMWRVPSDLKMLKRLKTQM
AEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAALAACGTENSGRLQDLGMELL
AKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDPGENSRSKGDCQTLSEGSP
GSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVVAVFSGLPAVEKRRKMV
TLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGMSSDSDIECDTENEE
QEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDENSGR"
BASE COUNT 969 a 676 c 853 g 839 t
ORIGIN
1 gctggccggc ggctgagccg ggagaaagga gctgcggcca ccgttcgccc tacttctgcg
61 cctcggggcg ggcgcgccgg taaaaatggc gaaatggggg taggcggcgc tggacctgaa
121 gagatggggc gcgcaggtgg ggcggttgtc agagccccct gacgtgggcg ccgggctttt
181 atcggcgatt tgatctggcg acctcgggcc ggcgcctaag aggtcagact gcggagcctg
241 cgggtcgcca gcggccccgc cgagagccgg aggcaatgga tgaacagagc gtggagagca
301 ttgctgaggt tttccgatgt ttcatttgta tggagaaatt gcgggatgca cgcctgtgtc
361 ctcattgctc caaactgtgt tgtttcagct gtattaggcg ctggctgaca gagcagagag
421 ctcaatgtcc tcattgccgt gctccactcc agctacgaga actagtaaat tgtcgttggg
481 cagaagaagt aacacaacag cttgatactc ttcaactctg cagtctcacc aaacatgaag
541 aaaatgaaaa ggacaaatgt gaaaatcacc atgaaaaact tagtgtattt tgctggactt
601 gtaagaagtg tatctgccat cagtgtgcac tttggggagg aatgcatggc ggacatacct
661 ttaaaccttt ggcagaaatt tatgagcaac acgtcactaa agtgaatgaa gaggtagcca
721 aacttcgtcg gcgtctcatg gaactgatca gcttagttca agaagtggaa aggaatgtag
781 aagctgtaag aaatgcaaaa gatgagcgtg ttcgggaaat taggaatgca gtggagatga
841 tgattgcacg gttagacaca cagctgaaga ataagcttat aacactgatg ggtcagaaga
901 catctctaac ccaagaaaca gagcttttgg aatccttact tcaggaggtg gagcaccagt
961 tgcggtcttg tagtaagagt gagttgatat ctaagagctc agagatcctt atgatgtttc
1021 agcaagttca tcggaagccc atggcatctt ttgttaccac tcctgttcca ccagacttta
1081 ccagtgaatt agtgccatct tacgattcag ctacttttgt tttagagaat ttcagcactt
1141 tgcgtcagag agcagatcct gtttacagtc cacctcttca agtttcagga ctttgctgga
1201 ggttaaaagt ttacccagat ggaaatggag ttgtgcgagg ttactactta tctgtgtttc
1261 tggagctctc agctggcttg cctgaaactt ctaaatatga atatcgtgta gagatggttc
1321 accagtcctg taatgatcct acaaaaaata tcattcgaga atttgcatct gactttgaag
1381 ttggagaatg ctggggctat aatagatttt tccgtttgga cttactcgca aatgaaggat
1441 acttgaatcc acaaaatgat acagtgattt taaggtttca ggtacgttca ccaactttct
1501 ttcaaaaatc ccgggaccag cattggtaca ttactcagtt ggaagctgca cagactagtt
1561 atatccaaca aataaacaac cttaaagaga gacttactat tgagctgtct cgaactcaga
1621 agtcaagaga tttgtcacca ccagataacc atcttagccc ccaaaatgat gatgctctgg
1681 agacacgagc taagaagtct gcatgctctg acatgcttct cgaaggtggt cctactacag
1741 cttctgtaag agaggccaaa gaggatgaag aagatgagga gaagattcag aatgaagatt
1801 atcatcacga gctttcagat ggagatctgg atctggatct tgtttatgag gatgaagtaa
1861 atcagctcga tggcagcagt tcctctgcta gttccacagc aacaagtaat acagaagaaa
1921 atgatattga tgaagaaact atgtctggag aaaatgatgt ggaatataac aacatggaat
1981 tagaagaggg agaactcatg gaagatgcag ctgctgcagg acccgcaggt agtagccatg
2041 gttatgtggg ttccagtagt agaatatcaa gaagaacaca tttatgctcc gctgctacca
2101 gtagtttact agacattgat ccattaattt taatacattt gttggacctt aaggaccgga
2161 gcagtataga aaatttgtgg ggcttacagc ctcgcccacc tgcttcactt ctgcagccca
2221 cagcatcata ttctcgaaaa gataaagacc aaaggaagca acaggcaatg tggcgagtgc
2281 cctctgattt aaagatgcta aaaagactca aaactcaaat ggccgaagtt cgatgtatga
2341 aaactgatgt aaagaataca ctttcagaaa taaaaagcag cagtgctgct tctggagaca
2401 tgcagacaag ccttttttct gctgaccagg cagctctggc tgcatgtgga actgaaaact
2461 ctggcagatt gcaggatttg ggaatggaac tcctggcaaa gtcatcagtt gccaattgtt
2521 acatacgaaa ctccacaaat aagaagagta attcgcccaa gccagctcga tccagtgtag
2581 caggtagtct atcacttcga agagcagtgg accctggaga aaatagtcgt tcaaagggag
2641 actgtcagac tctgtctgaa ggctccccag gaagctctca gtctgggagc aggcacagtt
2701 ctccccgagc cttgatacat ggcagtatcg gtgatattct gccaaaaact gaagaccggc
2761 agtgtaaagc tttggattca gatgctgttg tggttgcagt tttcagtggc ttgcctgcgg
2821 ttgagaaaag gaggaaaatg gtcaccttgg gggctaatgc taaaggaggt catctggaag
2881 gactgcagat gactgatttg gaaaataatt ctgaaactgg agagttacag cctgtactac
2941 ctgaaggagc ttcagctgcc cctgaagaag gaatgagtag cgacagtgac attgaatgtg
3001 acactgagaa tgaggagcag gaagagcata ccagtgtggg cgggtttcac gactccttca
3061 tggtcatgac acagcccccg gatgaagata cacattccag ttttcctgat ggtgaacaaa
3121 taggccctga agatctcagc ttcaatacag atgaaaatag tggaaggtaa ttgccaaatc
3181 aagagaactg acttgcaagc taccttgacc ctgaattttg ctgtagttgg tgctcaaatt
3241 tgtcatcagt cagataatca gatttggtct tatttcttca ttatctcgac ctgaaatagt
3301 aatttggaaa ctgttggaag gtggcacagt ttagtct
//