LOCUS AK289628 1238 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78199 complete cds, highly similar to Homo
sapiens osteoglycin (osteoinductive factor, mimecan) (OGN),
transcript variant 3, mRNA.
ACCESSION AK289628
VERSION AK289628.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1238)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1238
/clone="BRAMY2016960"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000422425"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 277..1173
/codon_start=1
/note="highly similar to Homo sapiens osteoglycin
(osteoinductive factor, mimecan) (OGN), transcript
variant 3, mRNA"
/protein_id="BAF82317.1"
/transl_table=1
/translation="MKTLQSTLLLLLLVPLIKPAPPTQQDSRIIYDYGTDNFEESIFS
QDYEDKYLDGKNIKEKETVIIPNEKSLQLQKDEAITPLPPKKENDEMPTCLLCVCLSG
SVYCEEVDIDAVPPLPKESAYLYARFNKIKKLTAKDFADIPNLRRLDFTGNLIEDIED
GTFSKLSLLEELSLAENQLLKLPVLPPKLTLFNAKYNKIKSRGIKANAFKKLNNLTFL
YLDHNALESVPLNLPESLRVIHLQFNNIASITDDTFCKANDTSYIRDRIEEIRLEGNP
IVLGKHPNSFICLKRLPIGSYF"
BASE COUNT 432 a 269 c 207 g 330 t
ORIGIN
1 gcatttcacc ctagagaaag aatgctggca aagatctcta ccacatggaa actgttctta
61 aagctgctgg gccctgaaat tttactcagc agtttgaaat caagacatag cttttctcat
121 tcaccctccc acttggggct aatgcacaga catgaacatc tattgaggaa aaccacaaaa
181 aacttcaaaa cagctacaac gggaaaaaga gagttttgtc ccacagtcag caggccacta
241 gtttattaac ttccagtcac cttgattttt gctaaaatga agactctgca gtctacactt
301 ctcctgttac tgcttgtgcc tctgataaag ccagcaccac caacccagca ggactcacgc
361 attatctatg attatggaac agataatttt gaagaatcca tatttagcca agattatgag
421 gataaatacc tggatggaaa aaatattaag gaaaaagaaa ctgtgataat acccaatgag
481 aaaagtcttc aattacaaaa agatgaggca ataacaccat tacctcccaa gaaagaaaat
541 gatgaaatgc ccacgtgtct gctgtgtgtt tgtttaagtg gctctgtata ctgtgaagaa
601 gttgacattg atgctgtacc acccttacca aaggaatcag cctatcttta cgcacgattc
661 aacaaaatta aaaagctgac tgccaaagat tttgcagaca tacctaactt aagaagactc
721 gattttacag gaaatttgat agaagatata gaagatggta ctttttcaaa actttctctg
781 ttagaagaac tttcacttgc tgaaaatcaa ctactaaaac ttccagttct tcctcccaag
841 ctcactttat ttaatgcaaa atacaacaaa atcaagagta ggggaatcaa agcaaatgca
901 ttcaaaaaac tgaataacct caccttcctc tacttggacc ataatgccct ggaatccgtg
961 cctcttaatt taccagaaag tctacgtgta attcatcttc agttcaacaa catagcttca
1021 attacagatg acacattctg caaggctaat gacaccagtt acatccggga ccgcattgaa
1081 gagatacgcc tggagggcaa tccaatcgtc ctgggaaagc atccaaacag ttttatttgc
1141 ttaaaaagat taccgatagg gtcatacttt taacctctat tggtacaaca tataaatgaa
1201 agtacaccta cactaatagt ctgtctcaac aatgagta
//