LOCUS AK289604 2433 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76700 complete cds, highly similar to Homo
sapiens BBS2 mRNA.
ACCESSION AK289604
VERSION AK289604.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2433)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2433
/clone="BRALZ2013401"
/clone_lib="BRALZ2"
/db_xref="H-InvDB:HIT000422401"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="alzheimer cortex"
CDS 125..2290
/codon_start=1
/note="highly similar to Homo sapiens BBS2 mRNA"
/protein_id="BAF82293.1"
/transl_table=1
/translation="MLLPVFTLKLRHKISPRMVAIGRYDGTHPCLAAATQTGKVFIHN
PHTRNQHVSASRVFQSPLESDVSLLNINQAVSCLTAGVLNPELGYDALLVGTQTNLLA
YDVYNNSDLFYREVADGANAIVLGTLGDISSPLAIIGGNCALQGFNHEGSDLFWTVTG
DNVNSLALCDFDGDGKKELLVGSEDFDIRVLKEDEIVAEMTETEIVTSLCPMYGSRFG
YALSNGTVGVYDKTSRYWRIKSKNHAMSIHAFDLNSDGVNELITGWSNGKVDARSDRT
GEVIFKDNFSSAIAGVVEGDYRMDGHIQLICCSVDGEIRGYLPGTAEMRGNLMDTSAE
QDLIRELSQKKQNLLLELRNYEENAKAELASPLNEADGHRGIIPANTRLHTTLSVSLG
NETQTAHTELRISTSNDTIIRAVLIFAEGIFTGESHVVHPSIHNLSSSICIPIVPPKD
VPVDLHLKAFVGYRSSTQFHVFESTRQLPRFSMYALTSLDPASEPISYVNFTIAERAQ
RVVVWLGQNFLLPEDTHIQNAPFQVCFTSLRNGGHLHIKIKLSGEITINTDDIDLAGD
IIQSMASFFAIEDLQVEADFPVYFEELRKVLVKVDEYHSVHQKLSADMADHSNLIRSL
LVGAEDARLMRDMKTMKSRYMELYDLNRDLLNGYKIRCNNHTELLGNLKAVNQAIQRA
GRLRVGKPKNQVITACRDAIRSNNINTLFKIMRVGTASS"
BASE COUNT 644 a 546 c 605 g 638 t
ORIGIN
1 gtccggcctg aggcggctgg ggccgcgcag gtagtgtccc tgcacttctt gcccgggcgc
61 gtgaggccag ctccgctgcg cttgtctcca gcttccagcc ctcctcccct aagccgccgc
121 catcatgctg ctgcctgtgt tcaccctgaa actgcgccac aaaatcagcc cccgaatggt
181 ggccataggg cgctacgacg ggactcaccc gtgcctggcg gccgccaccc aaacgggcaa
241 ggtttttatt cataatcctc atacacggaa ccagcatgtc agtgcatcca gggtcttcca
301 gagccccctg gaatctgatg tttctcttct caacattaac caggcagtca gctgtctgac
361 tgcaggcgta ttgaaccctg agcttggcta tgatgccctt ttagtgggga cacagactaa
421 tcttttggct tatgatgtct acaataattc ggatttgttc tacagagagg tagcagatgg
481 ggcaaatgca attgtgctgg ggacattggg agacatttct tcccctcttg cgattattgg
541 tggcaattgt gctctgcaag gtttcaatca tgaaggaagt gatctctttt ggacggttac
601 tggagacaat gttaattcct tggccttgtg tgactttgat ggtgatggaa agaaagagct
661 tcttgttgga tctgaggatt ttgatatccg agttcttaag gaagatgaga ttgtggcaga
721 aatgacagaa acagagatag tcacctctct ttgtcccatg tatggcagtc gatttggtta
781 tgccctttcc aatggcacag ttggagttta tgacaaaaca tcccgatact ggagaattaa
841 atcgaaaaat catgccatga gcattcatgc ttttgacctt aattctgatg gagtgaatga
901 actgataact ggttggtcca atgggaaggt tgatgctcga agtgaccgaa ctggggaggt
961 catctttaag gacaattttt cttctgcaat tgccggtgtg gtagagggag attaccggat
1021 ggatggccac atacagttaa tctgctgctc agtggatggg gaaatccggg gctacctgcc
1081 tggcacggct gagatgaggg gcaacctcat ggacaccagt gcagagcagg acctgatccg
1141 agagctgagt cagaagaagc agaatctgtt gctggaactc cgtaactatg aggaaaatgc
1201 caaggctgaa ttggccagtc cactgaacga ggctgatggg catcggggca taatcccagc
1261 caataccagg ctccacacca cgctctcagt cagcctgggg aatgagaccc aaactgctca
1321 tacagaatta cgcatttcca cttctaatga caccatcatc cgagcagtat tgatttttgc
1381 agaaggaatt tttacaggtg aaagccacgt ggtacatccc agcattcaca acctctccag
1441 ttccatctgc atccctattg tgcctcccaa agatgtccct gtggatctgc acttgaaggc
1501 attcgtgggt tacagaagca gcacccagtt tcatgtattt gaatcgacaa gacagctccc
1561 tcgattctcc atgtatgcgc tgaccagcct ggaccctgcc agtgagccaa tcagttatgt
1621 taactttacc attgcagaac gggcacagag ggttgttgta tggctcggtc agaactttct
1681 gttaccagaa gacactcaca ttcagaatgc tccatttcaa gtgtgtttca catctttacg
1741 gaatggcggc cacctgcata taaaaataaa acttagtgga gagatcacta taaatactga
1801 tgatattgat ttggctggtg atatcatcca gtcaatggca tcattttttg ctattgaaga
1861 ccttcaagta gaagcggatt ttcctgtcta ttttgaggaa ttacgaaagg tgctagttaa
1921 ggtggatgaa tatcattcag tgcatcagaa gctcagtgct gatatggctg atcattctaa
1981 tttgatccga agtttgctgg tcggagctga ggatgctcgt ctgatgaggg acatgaaaac
2041 aatgaagagt cgttatatgg aactctatga ccttaataga gacttgctaa atggatataa
2101 aattcgctgt aacaatcaca cagagctgtt gggaaacctc aaagcagtaa atcaagcaat
2161 tcaaagagca ggtcgtctgc gggttggaaa accaaagaac caggtgatca ctgcttgtcg
2221 ggatgcaatt cgaagcaata acatcaacac actgttcaaa atcatgcgag tggggacagc
2281 ttcttcctag gtgaggaaaa tacaggtcat gaagttcctg gcaaagattt tctgttaaaa
2341 acctatgctg gtttgctttg gatcacaccc tggtgaaccc cgggtgctaa gaatgaaaat
2401 aaccttggtg agttgtacaa attaaagaca aag
//