LOCUS AK289573 2821 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77227 complete cds, highly similar to Homo
sapiens protein tyrosine phosphatase, non-receptor type 12
(PTPN12), mRNA.
ACCESSION AK289573
VERSION AK289573.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2821)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2821
/clone="BRACE3045120"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000422370"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 36..2378
/codon_start=1
/note="highly similar to Homo sapiens protein tyrosine
phosphatase, non-receptor type 12 (PTPN12), mRNA"
/protein_id="BAF82262.1"
/transl_table=1
/translation="MEQVEILRKFIQRVQAMKSPDHNGEDNFARDFMRLRRLSTKYRT
EKIYPTATGEKEENVKKNRYKDILPFDHSRVKLTLKTPSQDSDYINANFIKGVYGPKA
YVATQGPLANTVIDFWRMIWEYNVVIIVMACREFEMGRKKCERYWPLYGEDPITFAPF
KISCEDEQARTDYFIRTLLLEFQNESRRLYQFHYVNWPDHDVPSSFDSILDMISLMRK
YQEHEDVPICIHCSAGCGRTGAICAIDYTWNLLKAGKIPEEFNVFNLIQEMRTQRHSA
VQTKEQYELVHRAIAQLFEKQLQLYEIHGAQKIADGVNEINTENMVSSIEPEKQDSPP
PKPPRTRSCLVEGDAKEEILQPPEPHPVPPILTPSPPSAFPTVTTVWQDNDRYHPKPV
LHMVSSEQHSADLNRNYSKSTELPGKNESTIEQIDKKLERNLSFEIKKVPLQEGPKSF
DGNTLLNRGHAIKIKSASPCIADKISKPQELSSDLNVGDTSQNSCVDCSVTQSNKVSV
TPPEESQNSDTPPRPDRLPLDEKGHVTWSFHGPENAIPIPDLSEGNSSDINYQTRKTV
SLTPSPTTQVETPDLVDHDNTSPLFRTPLSFTNPLHSDDSDSDERNSDGAVTQNKTNI
STASATVSAATSTESISTRKVLPMSIARHNIAGTTHSGAEKDVDVSEDSPPPLPERTP
ESFVLASEHNTPVRSEWSELQSQERSEQKKSEGLITSENEKCDHPAGGIHYEMCIECP
PTFSDKREQISENPTEATDIGFGNRCGKPKGPRDPPSEWT"
BASE COUNT 965 a 543 c 560 g 753 t
ORIGIN
1 ggggccagcg accgcagccg gggggacgcg ggaggatgga gcaagtggag atcctgagga
61 aattcatcca gagggtccag gccatgaaga gtcctgacca caatggggag gacaacttcg
121 cccgggactt catgcggtta agaagattgt ctaccaaata tagaacagaa aagatatatc
181 ccacagccac tggagaaaaa gaagaaaatg ttaaaaagaa cagatacaag gacatactgc
241 catttgatca cagccgagtt aaattgacat taaagactcc ttcacaagat tcagactata
301 tcaatgcaaa ttttataaag ggcgtctatg ggccaaaagc atatgtagca actcaaggac
361 ctttagcaaa tacagtaata gatttttgga ggatgatatg ggagtataat gttgtgatca
421 ttgtaatggc ctgccgagaa tttgagatgg gaaggaaaaa atgtgagcgc tattggcctt
481 tgtatggaga agaccccata acgtttgcac catttaaaat ttcttgtgag gatgaacaag
541 caagaacaga ctacttcatc aggacactct tacttgaatt tcaaaatgaa tctcgtaggc
601 tgtatcagtt tcattatgtg aactggccag accatgatgt tccttcatca tttgattcta
661 ttctggacat gataagctta atgaggaaat atcaagaaca tgaagatgtt cctatttgta
721 ttcattgcag tgcaggctgt ggaagaacag gtgccatttg tgccatagat tatacgtgga
781 atttactaaa agctgggaaa ataccagagg aatttaatgt atttaattta atacaagaaa
841 tgagaacaca aaggcattct gcagtacaaa caaaggagca atatgaactt gttcatagag
901 ctattgccca actgtttgaa aaacagctac aactatatga aattcatgga gctcagaaaa
961 ttgctgatgg agtgaatgaa attaacactg aaaacatggt cagctccata gagcctgaaa
1021 aacaagattc tcctcctcca aaaccaccaa ggacccgcag ttgccttgtt gaaggggatg
1081 ctaaagaaga aatactgcag ccaccggaac ctcatccagt gccacccatc ttgacacctt
1141 ctcccccttc agcttttcca acagtcacta ctgtgtggca ggacaatgat agataccatc
1201 caaagccagt gttgcatatg gtttcatcag aacaacattc agcagacctc aacagaaact
1261 atagtaaatc aacagaactt ccagggaaaa atgaatcaac aattgaacag atagataaaa
1321 aattggaacg aaatttaagt tttgagatta agaaggtccc tctccaagag ggaccaaaaa
1381 gttttgatgg gaacacactt ttgaataggg gacatgcaat taaaattaaa tctgcttcac
1441 cttgtatagc tgataaaatc tctaagccac aggaattaag ttcagatcta aatgtcggtg
1501 atacttccca gaattcttgt gtggactgca gtgtaacaca atcaaacaaa gtttcagtta
1561 ctccaccaga agaatcccag aattcagaca cacctccaag gccagaccgc ttgcctcttg
1621 atgagaaagg acatgtaacg tggtcatttc atggacctga aaatgccata cccatacctg
1681 atttatctga aggcaattcc tcagatatca actatcaaac taggaaaact gtgagtttaa
1741 caccaagtcc tacaacacaa gttgaaacac ctgatcttgt ggatcatgat aacacttcac
1801 cactcttcag aacacccctc agttttacta atccacttca ctctgatgac tcagactcag
1861 atgaaagaaa ctctgatggt gctgtgaccc agaataaaac taatatttca acagcaagtg
1921 ccacagtttc tgctgccact agtactgaaa gcatttctac taggaaagta ttgccaatgt
1981 ccattgctag acataatata gcaggaacaa cacattcagg tgctgaaaaa gatgttgatg
2041 ttagtgaaga ttcacctcct cccctacctg aaagaactcc tgaatcgttt gtgttagcaa
2101 gtgaacataa tacacctgta agatcggaat ggagtgaact tcaaagtcag gaacgatctg
2161 aacaaaaaaa gtctgaaggc ttgataacct ctgaaaatga gaaatgtgat catccagcgg
2221 gaggtattca ctatgaaatg tgcatagaat gtccacctac tttcagtgac aagagagaac
2281 aaatatcaga aaatccaaca gaagccacag atattggttt tggtaatcga tgtggaaaac
2341 ccaaaggacc aagagatcca ccttcagaat ggacatgatt cagggagcta gaagacactt
2401 taagttatac tggaaaattc aggtgccact gaaagccaga tttatagtat tccatcttta
2461 atatgtggga ctaacagcag tgtagattgt taccttaata ttttttgctg ggaccatcta
2521 cctgccttat actacactta ggaaaaagta ttacatatgg tttattttga aacttcaagt
2581 attattgcct taatgtctct taaccctgtt acacgctgct tgtagacatg ttaatatagt
2641 aataccttta tgatatattg agtttaagga ctactctttt tctgttttat catgtatgca
2701 ttattttgta tatgtacagg gcaagtaggt atataatttg ataaagttgc aattgaaata
2761 ttattaacag aagatgtaag aaatttctgc atggtctaaa tctttgtgta ctttatttgt
2821 a
//