LOCUS AK289544 2519 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75570 complete cds, highly similar to Homo
sapiens contactin 1, mRNA.
ACCESSION AK289544
VERSION AK289544.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2519)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2519
/clone="BRACE3029259"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000422341"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 320..2203
/codon_start=1
/note="highly similar to Homo sapiens contactin 1, mRNA"
/protein_id="BAF82233.1"
/transl_table=1
/translation="MKMWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDKGFGPIFE
EQPINTIYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINN
PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDP
PYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSI
TKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWR
KVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWV
EHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYDVTFENAGMYQCI
AENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK
GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRII
LAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNG
ELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGKNRKGGEINMVDSFLPVCASLP
PTW"
BASE COUNT 768 a 491 c 540 g 720 t
ORIGIN
1 gctttatttg aaagtattgc tatgtagaca gccggctttt ctgtcatcta acctgctctc
61 cccaggttgg ctgaaggatg ggagcggctg tgcctgcctg tgaggtcaca gcatgaagtc
121 cttttaactt gctttctgct gcaggagaga ggcgtattgt ggtataactg ttgctgtatt
181 tattcaaatg gacaatttgc aatagatatt atacccagga cgacagataa gtcaacacat
241 aaggtgttta aaattatcca actgccatag agctaaattc ttttttggaa aattgaaccg
301 aacttctact gaatacaaga tgaaaatgtg gttgctggtc agtcatcttg tgataatatc
361 tattactacc tgtttagcag agtttacatg gtatagaaga tatggtcatg gagtttctga
421 ggaagacaaa ggatttggac caatttttga agagcagcca atcaatacca tttatccaga
481 ggaatcactg gaaggaaaag tctcactcaa ctgtagggca cgagccagcc ctttcccggt
541 ttacaaatgg agaatgaata atggggacgt tgatctcaca agtgatcgat acagtatggt
601 aggaggaaac cttgttatca acaaccctga caaacagaaa gatgctggaa tatactactg
661 tttagcatct aataactacg ggatggtcag aagcactgaa gcaaccctga gctttggata
721 tcttgatcct ttcccacctg aggaacgtcc tgaggtcaga gtaaaagaag ggaaaggaat
781 ggtgcttctc tgtgaccccc cataccattt tccagatgat cttagctatc gctggcttct
841 aaatgaattt cctgtattta tcacaatgga taaacggcga tttgtgtctc agacaaatgg
901 caatctctac attgcaaatg ttgaggcttc cgacaaaggc aattattcct gctttgtttc
961 cagtccttct attacaaaga gcgtgttcag caaattcatc ccactcattc caatacctga
1021 acgaacaaca aaaccatatc ctgctgatat tgtagttcag ttcaaggatg tatatgcatt
1081 gatgggccaa aatgtgacct tagaatgttt tgcacttgga aatcctgttc cggatatccg
1141 atggcggaag gttctagaac caatgccaag cactgctgag attagcacct ctggggctgt
1201 tcttaagatc ttcaatattc agctagaaga tgaaggcatc tatgaatgtg aggctgagaa
1261 cattagagga aaggataaac atcaagcaag aatttatgtt caagcattcc ctgagtgggt
1321 agaacacatc aatgacacag aggtggacat aggcagtgat ctctactggc cttgtgtggc
1381 cacaggaaag cccatcccta caatccgatg gttgaaaaat ggatatgcgt atcataaagg
1441 ggaattaaga ctgtatgatg tgacttttga aaatgccgga atgtatcagt gcatagctga
1501 aaacacatat ggagccattt atgcaaatgc tgagttgaag atcttggcgt tggctccaac
1561 ttttgaaatg aatcctatga agaaaaagat cctggctgct aaaggtggaa gggtgataat
1621 tgaatgcaaa cctaaagctg caccgaaacc aaagttttca tggagtaaag ggacagagtg
1681 gcttgtcaat agcagcagaa tactcatttg ggaagatggt agcttggaaa tcaacaacat
1741 tacaaggaat gatggaggta tctatacatg ctttgcagaa aataacagag ggaaagctaa
1801 tagcactgga acccttgtta tcacagatcc tacgcgaatt atattggccc caattaatgc
1861 cgatatcaca gttggagaaa acgccaccat gcagtgtgct gcgtcctttg atcctgcctt
1921 ggatctcaca tttgtttggt ccttcaatgg ctatgtgatc gattttaaca aagagaatat
1981 tcactaccag aggaatttta tgctggattc caatggggaa ttactaatcc gaaatgcgca
2041 gctgaaacat gctggaagat acacatgcac tgcccagaca attgtggaca attcttcagc
2101 ttcagctgac cttgtagtga gaggtaaaaa cagaaaaggt ggagagataa acatggtgga
2161 ttcctttctc cccgtctgtg caagcctgcc tccaacctgg tgatcgttga cactcaccat
2221 ttctgtgaaa gacttttttt tttaacatat tatactagat ttgactaact caatcttgta
2281 gcttctgcag ttctccccac ccccaaccta gttcttagag tatgtttccc cttttgaaac
2341 atgtaaacat actttgggca taaatatttt ttaaaatata actataatgc ttcactaata
2401 ccttaaaaat gcctagtgaa ctaactcagt acattatata atggccaagt gaaagttttg
2461 tgttttcatg tcctgttttt ctttgaaatt atatagccca gaaattagct cattatctg
//