LOCUS AK289509 2048 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77838 complete cds, highly similar to Homo
sapiens CLIP-170-related protein (CLIPR-59), mRNA.
ACCESSION AK289509
VERSION AK289509.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2048)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2048
/clone="BRACE3006469"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000422306"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 283..1926
/codon_start=1
/note="highly similar to Homo sapiens CLIP-170-related
protein (CLIPR-59), mRNA"
/protein_id="BAF82198.1"
/transl_table=1
/translation="MTKTDPAPMAPPPRGEEEEEEEEDEPVPEAPSPTQERRQKPVVH
PSAPAPLPKDYAFTFFDPNDPACQEILFDPQTTIPELFAIVRQWVPQVQHKIDVIGNE
ILRRGCHVNDRDGLTDMTLLHYACKAGAHGVGDPAAAVRLSQQLLALGADVTLRSRWT
NMNALHYAAYFDVPDLVRVLLKGARPRVVNSTCSDFNHGSALHIAASSLCLGAAKCLL
EHGANPALRNRKGQVPAEVVPDPMDMSLDKAEAALVAKELRTLLEEAVPLSCALPKVT
LPNYDNVPGNLMLSALGLRLGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGK
NDGSVGGVRYFICPPKQGLFASVSKISKAVDAPPSSVTSTPRTPRMDFSRVTGKGRRE
HKGKKKTPSSPSLGSLQQRDGAKAEVGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIEL
DQPTGKHDGSVFGVRYFTCPPRHGVFAPASRIQRIGGSTDSPGDSVGAKKVHQVTMTQ
PKRTFTTVRTPKDIASENSISRLLFCCWFPWMLRAEMQS"
BASE COUNT 411 a 658 c 629 g 350 t
ORIGIN
1 agccgcgact gaggggcctg acgcgggagg agaagaatgg ggggctgggc ctgggggagg
61 tggcaggcgc tgggcgcaca caccggggcc ctctatgggt aacgggggtc cctatggttg
121 cccaagatcc agttgcgcgg aggccacccg gggccctgga agctcctagg ggcttggacc
181 ctggagcctg ccgggcaccc tctccagctg acctctgcct ccaggatttg cctgaaggct
241 gcccccaact ctgcacccgc cccccgaggg ccaccgagga ccatgactaa gacagatcct
301 gccccgatgg ccccgccacc ccgaggagag gaggaagaag aggaggagga ggatgaaccc
361 gtccccgagg cccccagccc cacccaggag cgccggcaga agcctgttgt gcacccctcg
421 gcacctgccc ccctccctaa ggactacgct ttcaccttct tcgatcccaa tgacccggcg
481 tgccaggaga tcctgtttga ccctcagacc accatccccg agctgtttgc cattgtgcgc
541 cagtgggtgc cccaagtcca gcacaagata gacgtcatcg gcaatgagat tctgcgccga
601 ggctgccatg tgaacgatcg tgacgggctg accgacatga cactgctcca ctatgcgtgc
661 aaagctgggg cccacggagt cggggacccc gcggcagccg tgcgcctctc gcagcagctg
721 ctggcgctgg gcgcagatgt gacgctgcgc agccgctgga ccaacatgaa cgcgcttcac
781 tacgcggcct attttgatgt gcccgacctc gtgcgtgtgc tgctgaaggg tgcgaggccg
841 cgagtggtga actccacgtg cagtgacttc aaccacggct cagccctgca catcgctgct
901 tccagcctgt gcctgggcgc cgccaaatgt ttgctggagc acggcgccaa ccctgcgctg
961 aggaatcgaa aaggacaggt gccggcggag gtggtcccag atcctatgga catgtccctg
1021 gacaaggcag aggcggcact ggtggccaag gagctgcgga cgcttctgga agaggcagtg
1081 ccactatctt gcgccctccc caaggtcacg ctacccaact atgacaacgt cccaggcaat
1141 ctcatgctta gcgcactggg cttgcgcctg ggagaccgcg tgctgctgga tggccagaag
1201 acgggcacac tgcggttctg tgggaccacg gagtttgcca gcggccagtg ggtgggcgtg
1261 gagctggacg aacctgaggg caagaacgat ggcagcgttg ggggcgttcg gtacttcatc
1321 tgccctccca agcagggtct ctttgcctcc gtgtccaaga tctccaaggc agtggacgca
1381 cccccctcct ctgtcacctc cacaccccgg accccccgga tggacttctc ccgtgtcacc
1441 ggcaaaggcc gcagggaaca caaaggcaag aagaagaccc catcatcccc atctctgggc
1501 agcttgcagc agcgtgacgg ggccaaggct gaggttggag accaggtcct tgtcgcgggc
1561 cagaagcagg ggatcgtgcg cttctacggg aagacagact ttgccccagg ttactggtat
1621 ggcatcgagc tggaccagcc cacaggcaag catgatggct ctgtcttcgg tgtccggtac
1681 ttcacttgcc ccccgaggca tggggtcttc gcaccagcat cccgtattca gaggattggc
1741 ggatccactg attcccccgg ggacagcgtt ggagccaaaa aagtgcatca agtgacaatg
1801 acgcagccca aacgcacctt caccacagtc cggaccccaa aggacattgc atcagagaac
1861 tccatttcca ggttgctgtt ctgctgctgg ttcccctgga tgctgagggc ggagatgcag
1921 tcttagaggc cctggacacc tgacaaagag acagagtccc cactagcatc tcctgacacc
1981 cgaggagccc tgagtcaccc tgagatagag attcccagta acacatccag agtagagacc
2041 cctgttag
//