LOCUS AK289502 5070 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75567 complete cds, highly similar to Homo
sapiens protein tyrosine phosphatase, non-receptor type 23
(PTPN23), mRNA.
ACCESSION AK289502
VERSION AK289502.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5070)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..5070
/clone="BRACE3000007"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000422299"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 65..4975
/codon_start=1
/note="highly similar to Homo sapiens protein tyrosine
phosphatase, non-receptor type 23 (PTPN23), mRNA"
/protein_id="BAF82191.1"
/transl_table=1
/translation="MEAVPRMPMIWLDLKEAGDFHFQPAVKKFVLKNYGENPEAYNEE
LKKLELLRQNAVRVPRDFEGCSVLRKYLGQLHYLQSRVPMGSGQEAAVPVTWTEIFSG
KSVAHEDIKYEQACILYNLGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGAFAYLREH
FPQAYSVDMSRQILTLNVNLMLGQAQECLLEKSMLDNRKSFLVARISAQVVDYYKEAC
RALENPDTASLLGRIQKDWKKLVQMKIYYFAAVAHLHMGKQAEEQQKFGERVAYFQSA
LDKLNEAIKLAKGQPDTVQDALRFTMDVIGGKYNSAKKDNDFIYHEAVPALDTLQPVK
GAPLVKPLPVNPTDPAVTGPDIFAKLVPMAAHEASSLYSEEKAKLLREMMAKIEDKNE
VLDQFMDSMQLDPETVDNLDAYSHIPPQLMEKCAALSVRPDTVRNLVQSMQVLSGVFT
DVEASLKDIRDLLEEDELLEQKFQEAVGQAGAISITSKAELAEVRREWAKYMEVHEKA
SFTNSELHRAMNLHVGNLRLLSGPLDQVRAALPTPALSPEDKAVLQNLKRILAKVQEM
RDQRVSLEQQLRELIQKDDITASLVTTDHSEMKKLFEEQLKKYDQLKVYLEQNLAAQD
RVLCALTEANVQYAAVRRVLSDLDQKWNSTLQTLVASYEAYEDLMKKSQEGRDFYADL
ESKVAALLERTQSTCQAREAARQQLLDRELKKKPPPRPTAPKPLLPRREESEAVEAGD
PPEELRSLPPDMVAGPRLPDTFLGSATPLHFPPSPFPSSTGPGPHYLSGPLPPGTYSG
PTQLIQPRAPGPHAMPVAPGPALYPAPAYTPELGLVPRSSPQHGVVSSPYVGVGPAPP
VAGLPSAPPPQFSGPELAMAVRPATTTVDSIQAPIPSHTAPRPNPTPAPPPPCFPVPP
PQPLPTPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIGPQPQPHPQPHPSQAFGPQPP
QQPLPLQHPHLFPPQAPGLLPPQSPYPYAPQPGVLGQPPPPLHTQLYPGPAQDPLPAH
SGALPFPSPGPPQPPHPPLAYGPAPSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPSP
APSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQHGGTQSPGGGQPLLQPTKV
DAAEGRRPQALRLIERDPYEHPERLRQLQQELEAFRGQLGDVGALDTVWRELQDAQEH
DARGRSIAIARCYSLKNRHQDVMPYDSNRVVLRSGKDDYINASCVEGLSPYCPPLVAT
QAPLPGTAADFWLMVHEQKVSVIVMLVSEAEMEKQKVARYFPTERGQPMVHGALSLAL
SSVRSTETHVERVLSLQFRDQSLKRSLVHLHFPTWPELGLPDSPSNLLRFIQEVHAHY
LHQRPLHTPIIVHCSSGVGRTGAFALLYAAVQEVEAGNGIPELPQLVRRMRQQRKHML
QEKLHLRFCYEAVVRHVEQVLQRHGVPPPCKPLASASISQKNHLPQDSQDLVLGGDVP
ISSIQATIAKLSIRPPGGLESPVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPL
PEAPQPKEEPPVPEAPSSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKHNFLQAHN
GQGLRATRPSDDPLSLLDPLWTLNKT"
BASE COUNT 1016 a 1756 c 1404 g 894 t
ORIGIN
1 gtggctgagc cagcagctgc agcagctacg ggagtggccg ggtggccggc gggtgccagc
61 cgccatggag gccgtgcccc gcatgcccat gatctggctg gacctgaagg aggccggtga
121 ctttcacttc cagccagctg tgaagaagtt tgtcctgaag aattatggag agaacccaga
181 agcctacaat gaagaactga agaagctgga gttgctcaga cagaatgctg tccgtgtccc
241 acgagacttt gagggctgta gtgtcctccg caagtacctc ggccagcttc attacctgca
301 gagtcgggtc cccatgggct cgggccagga ggccgctgtc cctgtcacct ggacagagat
361 cttctcaggc aagtctgtgg cccatgagga catcaagtac gagcaggcct gtattctcta
421 caaccttgga gcgctgcact ccatgctggg ggccatggac aagcgggtgt ctgaggaggg
481 catgaaggtc tcctgtaccc atttccagtg cgcagccggc gccttcgcct acctacggga
541 gcacttccct caagcctaca gcgtcgacat gagccgccag atccttacgc tcaacgtcaa
601 cctcatgctg ggccaggctc aggagtgcct cctggagaag tcgatgttgg acaacaggaa
661 gagctttctg gtggcccgca tcagtgcaca ggtggtagat tactacaagg aggcatgccg
721 ggccttggag aaccccgaca ctgcctcact gctgggccgg atccagaagg actggaagaa
781 acttgtgcag atgaagatct actacttcgc agccgtggct catctgcaca tgggaaagca
841 ggccgaggag cagcagaagt tcggggagcg ggttgcatac ttccagagcg ccctggacaa
901 gctcaatgaa gccatcaagt tggccaaggg ccagcctgac actgtgcaag acgcgcttcg
961 cttcactatg gatgtcattg ggggaaagta caattctgcc aagaaggaca acgacttcat
1021 ttaccatgag gctgtcccag cattggacac ccttcagcct gtaaaaggag cccccttggt
1081 gaagcccttg ccagtgaacc ccacagaccc agctgttaca ggccctgaca tctttgccaa
1141 actggtaccc atggctgccc acgaggcctc gtcactgtac agtgaggaga aggccaagct
1201 gctccgggag atgatggcca agattgagga caagaatgag gtcctggacc agttcatgga
1261 ttcaatgcag ttggatcccg agacggtgga caaccttgat gcctacagcc acatcccacc
1321 ccagctcatg gagaagtgcg cggctctcag cgtccggccc gacactgtca ggaaccttgt
1381 acagtccatg caagtgctgt caggtgtgtt cacggatgtg gaggcttccc tgaaggacat
1441 cagagatctg ttggaggagg atgagctgct agagcagaag tttcaggagg cggtgggcca
1501 ggcaggggcc atctccatca cctccaaggc tgagctggca gaggtgaggc gagaatgggc
1561 caagtacatg gaagtccatg agaaggcctc cttcaccaac agtgagctgc accgtgccat
1621 gaacctgcac gtcggcaacc tgcgcctgct cagcgggccg cttgaccagg tccgggctgc
1681 cctgcccaca ccggccctct ccccagagga caaggccgtg ctgcaaaacc taaagcgcat
1741 cctggctaag gtgcaggaga tgcgggacca gcgcgtgtcc ctggagcagc agctgcgtga
1801 gcttatccag aaagatgaca tcactgcctc gctggtcacc acagaccact cagagatgaa
1861 gaagttgttc gaggagcagc tgaaaaagta tgaccagctg aaggtgtacc tggagcagaa
1921 cctggccgcc caggaccgtg tcctctgtgc actgacagag gccaacgtgc agtacgcagc
1981 cgtgcggcgg gtactcagcg acttggacca aaagtggaac tccacgctgc agaccctggt
2041 ggcctcgtat gaagcctatg aggacctgat gaagaagtcg caggagggca gggacttcta
2101 cgcagatctg gagagcaagg tggctgctct gctggagcgc acgcagtcca cctgccaggc
2161 ccgcgaggct gcccgccagc agctcctgga cagggagctg aagaagaagc cgccgccacg
2221 gcccacagcc ccaaagccgc tgctgccccg cagggaggag agtgaggcag tggaagcagg
2281 agacccccct gaggagctgc gcagcctccc ccctgacatg gtggctggcc cacgactgcc
2341 tgacaccttc ctgggaagtg ccaccccgct ccactttcct cccagcccct tccccagctc
2401 cacaggccca ggaccccact atctctcagg ccccttgccc cctggtacct actcgggccc
2461 cacccagctg atacagccca gggccccagg gccccatgca atgcccgtag cacctgggcc
2521 tgccctctac ccagcccctg cctacacacc ggagctgggc cttgtgcccc gatcctcccc
2581 acagcatggc gtggtgagca gtccctatgt gggggtaggg ccggccccac cagttgcagg
2641 tctcccctcg gccccacctc ctcaattctc aggccccgag ttggccatgg cggttcggcc
2701 agccaccacc acagtagata gcatccaggc gcccatcccc agccacacag ccccacggcc
2761 aaaccccacc cctgctcctc ccccgccctg cttccctgtg cccccaccgc agccactgcc
2821 cacgccttac acctaccctg caggggctaa gcaacccatc ccagcacagc accacttctc
2881 ttctgggatc cccgcaggtt ttccagcccc aaggattggg ccccagcccc agccccatcc
2941 tcagccccat ccttcacaag cgtttgggcc tcagccccca cagcagcccc ttccactcca
3001 gcatccacat ctcttcccac cccaggcccc aggactccta cccccacaat ccccctaccc
3061 ctatgcccct cagcctgggg tcctggggca gccgccaccc cccctacaca cccagctcta
3121 cccaggtccc gctcaagacc ctctgccagc ccactcaggg gctctgcctt tccccagccc
3181 tgggccccct cagcctcccc atcccccact ggcatatggt cctgcccctt ctaccagacc
3241 catgggcccc caggcagccc ctcttaccat tcgagggccc tcgtctgctg gccagtccac
3301 ccctagtccc cacctggtgc cttcacctgc cccatctcca gggcctggtc cggtaccccc
3361 tcgcccccca gcagcagaac cacccccttg cctgcgccga ggcgccgcag ctgcagacct
3421 gctctcctcc agcccggaga gccagcatgg cggcactcag tctcctgggg gtgggcagcc
3481 cctgctgcag cccaccaagg tggatgcagc tgagggtcgt cggccgcagg ccctgcggct
3541 gattgagcgg gacccctatg aacatcctga gaggctgcgg cagttgcagc aggagctgga
3601 ggcctttcgg ggtcagctgg gggatgtggg agctctggac actgtctggc gagagctgca
3661 agatgcgcag gaacatgatg cccgaggccg ttccatcgcc attgcccgct gctactcact
3721 gaagaaccgg caccaggatg tcatgcccta tgacagtaac cgtgtggtgc tgcgctcagg
3781 caaggatgac tacatcaatg ccagctgcgt ggaggggctc tccccatact gccccccgct
3841 agtggcaacc caggccccac tgcctggcac agctgctgac ttctggctca tggtccatga
3901 gcagaaagtg tcagtcattg tcatgctggt ttctgaggct gagatggaga agcaaaaagt
3961 ggcacgctac ttccccaccg agaggggcca gcccatggtg cacggtgccc tgagcctggc
4021 attgagcagc gtccgcagca ccgaaaccca tgtggagcgc gtgctgagcc tgcagttccg
4081 agaccagagc ctcaagcgct ctcttgtgca cctgcacttc cccacttggc ctgagttagg
4141 cctgcccgac agccccagca acttgctgcg cttcatccag gaggtgcacg cacattacct
4201 gcatcagcgg ccgctgcaca cgcccatcat tgtgcactgc agctctggtg tgggccgcac
4261 gggagccttt gcactgctct atgcagctgt gcaggaggtg gaggctggga acggaatccc
4321 tgagctgcct cagctggtgc ggcgcatgcg gcagcagaga aagcacatgc tgcaggagaa
4381 gctgcacctc aggttctgct atgaggcagt ggtgagacac gtggagcagg tcctgcagcg
4441 ccatggtgtg cctcctccat gcaaaccctt ggccagtgca agcatcagcc agaagaacca
4501 ccttcctcag gactcccagg acctggtcct cggtggggat gtgcccatca gctccatcca
4561 ggccaccatt gccaagctca gcattcggcc tcctgggggg ttggagtccc cggttgccag
4621 cttgccaggc cctgcagagc ccccaggcct cccgccagcc agcctcccag agtctacccc
4681 aatcccatct tcctccccac cccccctttc ctccccacta cctgaggctc cccagcctaa
4741 ggaggagccg ccagtgcctg aagcccccag ctcggggccc ccctcctcct ccctggaatt
4801 gctggcctcc ttgaccccag aggccttctc cctggacagc tccctgcggg gcaaacagcg
4861 gatgagcaag cataactttc tgcaggccca taacgggcaa gggctgcggg ccacccggcc
4921 ctctgacgac cccctcagcc ttctggatcc actctggaca ctcaacaaga cctgaacagg
4981 ttttgcctac ctggtcctta cactacatca tcatctcatg cccacctgcc cacacccagc
5041 agagcttctc agtgggcaca gtctcttact
//