LOCUS AK289474 1587 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75947 complete cds, highly similar to Homo
sapiens single stranded DNA binding protein 3 (SSBP3), transcript
variant 3, mRNA.
ACCESSION AK289474
VERSION AK289474.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1587)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1587
/clone="BRACE2014971"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000422271"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 10..1095
/codon_start=1
/note="highly similar to Homo sapiens single stranded DNA
binding protein 3 (SSBP3), transcript variant 3, mRNA"
/protein_id="BAF82163.1"
/transl_table=1
/translation="MFAKGKGSAVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEI
RWEKNITLGEPPGFLHSWWCVFWDLYCAAPERRDTCEHSSEAKAFHDYSAAAAPSPVL
GNIPPNDGMPGGPIPPGFFQPFMSPRYAGGPRPPIRMGNQPPGGVPGTQPLLPNSMDP
TRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSGMRPPPNSLGPAMPGINMGPGAGR
PWPNPNSANSIPYSSSSPGTYVGPPGGGGPPGTPIMPSPADSTNSSDNIYTMINPVPP
GGSRSNFPMGPGSDGPMGGMGGMEPHHMNGSLGSGDIDGLPKNSPNNISGISNPPGTP
RDDGELGGNFLHSFQNDNYSPSMTMSV"
BASE COUNT 417 a 444 c 372 g 354 t
ORIGIN
1 ctgcaaacca tgtttgccaa aggcaaaggc tcggcggtgc cctcggatgg gcaggctcgg
61 gaaaagttag ctttatacgt ctacgaatat ttactgcacg taggagcaca gaaatctgca
121 cagaccttct tatcggagat tcgatgggaa aaaaacatca cgttgggaga accgcctggg
181 tttttgcact cgtggtggtg tgtattttgg gacctttact gtgcagctcc tgaaaggaga
241 gacacttgtg aacattcaag tgaagcaaaa gcctttcatg attatagtgc agcagctgcc
301 ccgagccccg tgcttggcaa cattcccccc aacgatggga tgccgggagg ccccatcccg
361 ccaggtttct ttcagccttt tatgtcaccg cgatacgcag gcggccccag gcccccgatc
421 agaatgggaa accagcctcc gggaggagtt cctgggacac agccattgct gcccaattct
481 atggatccca cacgacaaca aggccacccc aacatgggag gatcaatgca gagaatgaac
541 cctccccgag gcatggggcc catgggtccc ggcccacaga attacggcag cggcatgaga
601 ccaccaccca actccctcgg ccccgccatg cccgggatta acatgggccc gggagctggc
661 agaccctggc ccaatcctaa cagtgctaac tcaattccat actcctcctc atcacctggt
721 acctatgtgg gaccccctgg tggtggcggt cctccaggaa cacccattat gcccagtccc
781 gcagattcaa caaattccag tgacaacatc tacacaatga ttaatccagt gccgcctgga
841 ggcagccggt ccaacttccc gatgggtccc ggctcggacg gtccgatggg cggcatgggt
901 ggcatggagc cacaccacat gaatggatca ttagggtcag gcgacataga cggacttcca
961 aaaaattctc ctaacaacat aagtggcatt agcaatcctc caggcacccc tcgagatgac
1021 ggcgagctag gagggaactt cctccactcc tttcagaacg acaattattc tccaagcatg
1081 acgatgagtg tgtgatcccc ccttctccga gacgctgaga gagcaggcat tgcaggcggg
1141 aagatgccag aaattatgca agaagtgagg tgtcattatc caggagctgg tggggagggc
1201 atctccctgc tcccctcaac cccctcccac cccatccacg ccccctacct ttcccaattt
1261 tagtttcatg caataaaaag gccaaacttt ttattccata aaacaagaag gacaaaactc
1321 tcaaaaatgt atttcaagtc agtgaccaga aaaatcccac cccttgccct ttccccaaag
1381 gaccttttct gtacatgaca cttttttgtt gttttttgtt tggggtttta ccattgttgg
1441 gattttttta tttgttttca ggggggtttt ttgggggaaa atttttttaa atggaagctt
1501 ctagcaagcc ccccacccca atcaacctct atgctttctt cttaaaaaaa aaaaaaaagg
1561 aaaaaggaaa aaaaaaaaag gaaaacc
//