LOCUS AK225675 1387 bp mRNA linear HUM 17-NOV-2007 DEFINITION Homo sapiens mRNA for DEP domain containing 6 variant, clone: SYN01196. ACCESSION AK225675 VERSION AK225675.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1387) AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Direct Submission JOURNAL Submitted (21-JUL-2006) to the DDBJ/EMBL/GenBank databases. Contact:Akiko Tanaka RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro, Tsurumi, Yokohama, Kanagawa 230-0045, Japan URL :http://protein.gsc.riken.jp/ REFERENCE 2 AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Homo sapiens protein coding cDNA. JOURNAL Published Only in Database(2006) REFERENCE 3 AUTHORS Maruyama,K. and Sugano,S. TITLE Oligo-capping : a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. JOURNAL Gene 138, 171-174 (1994) REFERENCE 4 AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S. TITLE Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library . JOURNAL Gene 200, 149-156 (1997) COMMENT This work was supported in part by the National Project on Protein Structural and Functional Analysis, Ministry of Education, Culture, Sports, Science and Technology of Japan. Sumio Sugano, Yutaka Suzuki Laboratory of Functional Genomics Department of Medical Genome Sciences Graduate School of Frontier Sciences The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan URL: http://www.k.u-tokyo.ac.jp/index.html.en FEATURES Location/Qualifiers source 1..1387 /clone="SYN01196" /clone_lib="SYN" /db_xref="H-InvDB:HIT000384805" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="this clone is also named as hss001003675" /organism="Homo sapiens" /tissue_type="synovial membrane (knee)" misc_feature 99..1328 /product="DEP domain containing 6 variant" BASE COUNT 361 a 354 c 409 g 263 t ORIGIN 1 aaagatggcg cgggaagcgt ctgtgagggc agactgatcc gagcacccaa accctcggcg 61 gacagcggag ccagtggtag ccgcacggcc ctaaaaccat ggaggagggc ggcagcactg 121 gcagtgctgg cagtgacagc agcaccagcg ggagtggcgg ggcgcagcaa agggagctgg 181 agcgcatggc tgaggtcttg gtcaccgggg aacagctacg gctcaggctg cacgaagaaa 241 aggttattaa agatagacgt catcatctca agacctaccc aaactgtttt gtcgcaaaag 301 aactgattga ctggctgatt gaacacaaag aggcttctga cagagagacg gcaattaaac 361 tcatgcagaa attagcagac cggggcatta ttcaccatgt gtgtgatgag cataaggaat 421 tcaaggatgt caaactcttc taccgcttta gaaaggatga cggcaccttc ccattggata 481 atgaagtgaa ggcctttatg agaggacaga ggctatatga aaagctgatg agccctgaaa 541 acacactcct gcagcccagg gaggaggaag gggtcaagta tgagcgcacc ttcatggcat 601 ctgaattcct ggactggctg gttcaggaag gtgaggccac cacgaggaaa gaggcagagc 661 agctttgcca ccggcttatg gagcatggca tcatccagca tgtgtccagc aagcacccat 721 ttgtggacag caatcttctc taccagttca gaatgaactt ccggcggagg cgaagactga 781 tggagctgct caatgaaaag tccccctcct cccaggaaac tcatgacagt cccttctgcc 841 tgaggaagca gagccatgac aatcggaaat ctaccagctt tatgtcagtg agccccagca 901 aggagatcaa gatcgtgtct gcagtgagga gaagcagcat gagcagctgt ggcagcagcg 961 gctacttcag cagcagcccc accctcagca gcagcccccc tgtgctctgc aaccccaagt 1021 ccgtgctgaa gagacctgtc acctctgagg aactccttac tcccggggct ccgtacgcaa 1081 ggaagacatt cacgattgtt ggtgacgcgg ttggctgggg ttttgtggtg cgaggaagta 1141 agccatgcca catccaggct gtagacccca gtggccctgc agccgcagca ggaatgaagg 1201 tctgtcagtt tgtcgtctct gtcaacgggc tcaatgtcct gcatgtagac taccggaccg 1261 tgaacaatct gattctgacg ggcccacgga cgattgtcat ggaagtcatg gaggagttag 1321 agtgctgagc tcctgggcct cccagccctc cagtggcctg tgggtgaggg aagccagaat 1381 gacacaa //