LOCUS AK225541 2369 bp mRNA linear HUM 17-NOV-2007 DEFINITION Homo sapiens mRNA for Protein-arginine deiminase type I variant, clone: KAT12008. ACCESSION AK225541 VERSION AK225541.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2369) AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Direct Submission JOURNAL Submitted (21-JUL-2006) to the DDBJ/EMBL/GenBank databases. Contact:Akiko Tanaka RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro, Tsurumi, Yokohama, Kanagawa 230-0045, Japan URL :http://protein.gsc.riken.jp/ REFERENCE 2 AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Homo sapiens protein coding cDNA. JOURNAL Published Only in Database(2006) REFERENCE 3 AUTHORS Maruyama,K. and Sugano,S. TITLE Oligo-capping : a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. JOURNAL Gene 138, 171-174 (1994) REFERENCE 4 AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S. TITLE Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library . JOURNAL Gene 200, 149-156 (1997) COMMENT This work was supported in part by the National Project on Protein Structural and Functional Analysis, Ministry of Education, Culture, Sports, Science and Technology of Japan. Sumio Sugano, Yutaka Suzuki Laboratory of Functional Genomics Department of Medical Genome Sciences Graduate School of Frontier Sciences The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan URL: http://www.k.u-tokyo.ac.jp/index.html.en FEATURES Location/Qualifiers source 1..2369 /cell_line="KATO III" /cell_type="signet-ring cell carcinoma" /clone="KAT12008" /clone_lib="KAT" /db_xref="H-InvDB:HIT000384671" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="this clone is also named as hss001002838" /organism="Homo sapiens" misc_feature 95..2086 /product="Protein-arginine deiminase type I variant" BASE COUNT 523 a 682 c 676 g 488 t ORIGIN 1 attcagaact cacacttctt cctggcaaag aagtgcccag gacgggagct ggggagccag 61 ggctgatcta ggaggctggg agccaggtga caggatggcc ccaaagagag ttgtgcagct 121 gtccctgaag atgcctaccc atgccgtgtg tgtggtggga gtcgaggcac atgtggacat 181 tcacagtgat gtgcccaagg gtgccaacag cttcagggtc tctggaagct ccggggtgga 241 ggtcttcatg gtctacaacc gcacacgtgt gaaagagccc ataggcaagg cccgttggcc 301 gctagacact gatgcagaca tggtcgtatc tgtgggcaca gccagtaagg aattaaagga 361 cttcaaggtg agggtctcct actttgggga gcaggaagac caagctctgg gccgcagcgt 421 gctttacctc actggcgtcg atatttccct tgaggttgac acaggccgca caggcaaggt 481 gaagaggagc caaggggaca agaaaacctg gcgctggggc cctgagggct atggggctat 541 cttgctggtg aactgtgacc gggacaatca caggtccgca gagcctgacc tcacccacag 601 ctggctgatg tcgctggctg acctgcagga catgtcccca atgcagctga gctgcaatgg 661 ccccgacaag ctcttcgaca gccacaagct tgtcttgaac gtgccctttt ctgattccaa 721 aagagtgagg gtcttctgtg ccaggggtgg gaattctctc tcggactaca aacaggtgct 781 ggggccccag tgtctgtcct atgaagttga gcgacagcca ggggagcagg agatcaagtt 841 ctatgtggag gggctgacct tccccgatgc cgatttccta gggctggttc ccctcagtgt 901 cagcctggtg gacccgggga ccctgcccga ggtgaccctc ttcacagaca ctgtgggctt 961 ccgcatggcc ccctggatca tgactcccaa cactcagcct cctgaggagc tgtatgtgtg 1021 cagagtgatg gacactcatg gctccaatga gaaattcctg gaggacatgt cttatctgac 1081 attgaaagcc aactgcaagc tgaccatctg ccctcaagtt gaaaatcgaa atgaccgctg 1141 gatccaggac gagatggagt ttggctacat cgaggcccct cacaaatcct tccccgtggt 1201 ctttgactcc ccccggaaca ggggcctgaa agatttcccc tataagagga tcctgggtcc 1261 tgactttgga tatgttaccc gggagatccc gctccctggt ccctccagcc ttgactcctt 1321 cggcaacctg gacgtcagcc cgcccgtcac ggtgggcggc acggaatacc ccctgggccg 1381 gatcctcatc gggagcagct tccccaagtc cggtgggcgg cagatggcca gggcagtgcg 1441 gaacttcctg aaggcacagc aggtgcaggc acccgtggag ctctactcgg actggctctc 1501 tgtgggccat gtggacgagt ttctgacctt tgtgcctacc tctgaccaaa agggcttccg 1561 gctgctcctg gctagcccca gcgcttgcct caaactcttc caagagaaga aagaagaggg 1621 ttatggggag gcagcccagt ttgatgggtt aaaacaccag gcaaaaagaa gcattaatga 1681 gatgctggca gacagacacc tccagagaga caatcttcat gcacagaaat gcattgactg 1741 gaaccgtaat gtgctgaagc gggagctggg cctggcagag agtgacatcg tggacattcc 1801 ccagctcttc ttcctgaaaa acttctacgc ggaagccttc ttcccagaca tggttaacat 1861 ggtggtctta ggcaagtacc tgggcatccc caagccctac gggcccatca tcaatggccg 1921 ctgctgcctg gaggagaagg tgcagtccct gctggagcct ctgggcctgc actgcatctt 1981 cattgatgac tacttgtcct accacgagct gcagggggag atccactgtg gcaccaacgt 2041 gcgcaggaag ccctttccct tcaaatggtg gaacatggtg ccctgagcct gcccccaccc 2101 gccatcctct ctgccctctt gctagggaac cctgccaggg tgaaggcaag gaacaaccac 2161 ctggcctcca ttctcttggg ggagtcttgg cactttgcaa acatcctggc caccatgggc 2221 accaggacac agggatggat accacctacc ctcgcctctg gaatggccta cccaacccga 2281 gaagaatgca cctcattctt ccctggcctc tttcccaccc acagccccca gaggctctag 2341 atcaacaatg ttagcatgtt ccagaatgg //