LOCUS AK225506 1828 bp mRNA linear HUM 17-NOV-2007 DEFINITION Homo sapiens mRNA for hect domain and RLD 6 isoform a variant, clone: KAT03212. ACCESSION AK225506 VERSION AK225506.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1828) AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Direct Submission JOURNAL Submitted (21-JUL-2006) to the DDBJ/EMBL/GenBank databases. Contact:Akiko Tanaka RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro, Tsurumi, Yokohama, Kanagawa 230-0045, Japan URL :http://protein.gsc.riken.jp/ REFERENCE 2 AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Homo sapiens protein coding cDNA. JOURNAL Published Only in Database(2006) REFERENCE 3 AUTHORS Maruyama,K. and Sugano,S. TITLE Oligo-capping : a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. JOURNAL Gene 138, 171-174 (1994) REFERENCE 4 AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S. TITLE Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library . JOURNAL Gene 200, 149-156 (1997) COMMENT This work was supported in part by the National Project on Protein Structural and Functional Analysis, Ministry of Education, Culture, Sports, Science and Technology of Japan. Sumio Sugano, Yutaka Suzuki Laboratory of Functional Genomics Department of Medical Genome Sciences Graduate School of Frontier Sciences The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan URL: http://www.k.u-tokyo.ac.jp/index.html.en FEATURES Location/Qualifiers source 1..1828 /cell_line="KATO III" /cell_type="signet-ring cell carcinoma" /clone="KAT03212" /clone_lib="KAT" /db_xref="H-InvDB:HIT000384636" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="this clone is also named as hss001102618" /organism="Homo sapiens" misc_feature 3..1340 /product="hect domain and RLD 6 isoform a variant" BASE COUNT 575 a 363 c 374 g 516 t ORIGIN 1 gtcgactacc agaaaatact ttcaacataa atgaactctc caacttatta aacttttata 61 tagatagagg aagacagctc tttcgggata accacctgat acctgcagaa acccccagtc 121 ctgttatttt cagtgatttt ccatttatct ttaattcgct atccaaaatt aaattattgc 181 aagctgattc acatataaag atgcagatgt cagaaaagaa agcatacatg cttatgcatg 241 aaacaattct gcaaaaaaag gatgaatttc ctccatcacc cagatttata cttagagtca 301 gacgaagtcg cctggttaaa gatgctctgc gtcaattaag tcaagctgaa gctactgact 361 tctgcaaagt attagtggtt gaatttatta atgaaatttg tcctgagtct ggaggggtta 421 gttcagagtt cttccactgt atgtttgaag agatgaccaa gccagaatat ggaatgttca 481 tgtatcctga aatgtgttcc tgcatgtggt ttcctgccaa gcctaaacct gagaagaaaa 541 gatatttcct ctttggaatg ctgtgtggac tctccttatt caatttaaat gttgctaacc 601 ttcctttccc actggctctg tataaaaaac ttctggacca aaagccatca ttggaagatt 661 taaaagaact cagtcctcgg ttggggaaga gtttgcaaga agttctagat gatgctgctg 721 atgacattgg agatgcgctc tgcatacgct tttctataca ctgggaccaa aatgatgttg 781 acttaattcc aaatgggatc tccatacctg tggaccaaac caacaagaga gactatgttt 841 ctaagtatat tgattacatt ttcaacgtct ctgtaaaagc agtttatgag gaatttcaga 901 gaggatttta tagagtctgt gagaaggaga tacttagaca tttctaccct gaagaactaa 961 tgacagcaat cattggaaat actgattatg actggaaaca gtttgaacag aattcaaagt 1021 atgagcaagg ataccaaaaa tcacatccta ctatacagtt gttttggaag gctttccaca 1081 agctaacctt ggatgaaaag aaaaaattcc tctttttcct tacaggacgt gataggctgc 1141 atgcaagagg catacagaaa atggaaatag tatttcgctg tcctgaaact ttcagtgaaa 1201 gagatcaccc aacatcaata acttgtcata atattctctc cctccctaag tattctacaa 1261 tggaaagaat ggaggaagca ctccaagtag ccatcaacaa caacagagga tttgtctcac 1321 ccatgctcac acagtcataa tcacctctga gagactcagg gtgggctttc tcacacttgg 1381 atccttctgt tcttccttac acctaaataa tacaagagat taatgaatag tggttagaag 1441 tagttgaggg agagattggg ggaatgggga gatgatgatg atggtcaaag ggtgcaaaat 1501 ctcacacaag actgaggcag gagaataggg tacagagata gggatctaag gatgacttgg 1561 acacactccc tggcactgaa gagtctgaac actggcctgt gattggtcca ttccaggacc 1621 ttcatttgca taaggtatca aaccacatca gcctctgatt ggccatgggc cagacctgca 1681 ctctggccaa tgattggttc attccaggac attcatttgc ataaggagtc aaaccacacc 1741 agtcttggat tggctgtgag ccaattcacc tcagtctcta attggctgtg agtcagtctt 1801 tcatttacat agggtgtaac catcaaga //