LOCUS AK225500 1968 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for calsyntenin 1 isoform 1 variant, clone:
JTH08932.
ACCESSION AK225500
VERSION AK225500.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1968)
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (21-JUL-2006) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Homo sapiens protein coding cDNA.
JOURNAL Published Only in Database(2006)
REFERENCE 3
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eukaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 4
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library .
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
Sumio Sugano, Yutaka Suzuki
Laboratory of Functional Genomics Department of Medical Genome
Sciences Graduate School of Frontier Sciences The University of
Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan
URL: http://www.k.u-tokyo.ac.jp/index.html.en
FEATURES Location/Qualifiers
source 1..1968
/cell_line="JCR"
/clone="JTH08932"
/clone_lib="JTH"
/db_xref="H-InvDB:HIT000384630"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hss001102540"
/organism="Homo sapiens"
/tissue_type="thyroid"
misc_feature 3..467
/product="calsyntenin 1 isoform 1 variant"
BASE COUNT 423 a 571 c 536 g 438 t
ORIGIN
1 cccagccaca gttcgtgcac ccggaacacc gctcctttgt tgacctgtca ggctacaacc
61 tggccaaccc ccacccgttc gcagtcgtcc ccagcactgc gacagttgtg atcgtggtgt
121 gcgtcagctt cctggtgttc atgattatcc tgggggtatt tcggatccgg gccgcacatc
181 ggcggaccat gcgggatcag gacaccggga aggagaacga gatggactgg gacgactctg
241 ccccgaccat caccgtcaac cccatggaga cctatgagga ccagcacagc agtgaggagg
301 aggaggaaga ggaagaggaa gaggaaagcg aggacggcga agaagaggat gacatcacca
361 gcgccgagtc ggagagcagc gaggaggagg agggggagca gggcgacccc cagaacgcaa
421 cccggcagca gcagctggag tgggatgact ccaccctcag ctactgaccc gtgcccccgg
481 ccacctcggt ttctgctttc gaagactctg ctgccatccg ttctcccagt cccaagggtc
541 cacgatgtac aaagtcattt cggccagtag gtgtgcagac ccctccccgc cacgatcgtc
601 gctgtgcttg gtgtgtagga ccctaggctc cccgcccacc ctctgcctgg tcgcgctctt
661 cagtcccacg aggagctgac acgtcctctc tggccgccat ccggctcgca caggggcctc
721 ccagcgcctc aggccccgcg tttgtgtctg gagtctcccc ccggggagag gacactggcc
781 cctcgcactc cagaaaagcc atgccagctg ggctcgttga caaagggtaa aacatgctca
841 ctcccacccg gtaatcattt ttttcttttt ttaaaaaaag tttttatttt ttccaaacta
901 gtgcatgtat aaataatggc aggatggggg gtactgtgta gatgattaac tgacttttta
961 atattttgta aataaatcgg attccttgtg tcctttgtgc tagtgtaacc cgggactgga
1021 atgtaaagtg aagttcggag ctctgagcac gggctcttcc cgccgggtcc tccctcccca
1081 gaccccagag ggagaggccc accccgccca gccccgcccc agcccctgct caggtctgag
1141 tatggctggg agtcgggggc cacaggcctc tagctgtgct gctcaagaga ctggatcagg
1201 gtagctacaa gtggccgggc cttgcctttg ggattctacc tgttcctaat ttggtgtggg
1261 gtgcggggtc cctggcccct ttttccacac tcctcctccg acagcagctc cctgggcagt
1321 ggcctggtct caccgtgtgc agccttgtgg tttatgctta aatgtacatt ttcctgctgg
1381 taaaaggaga aactgagagg tgtcctgcag accggctgac cactcctttt ggagacggca
1441 ggaggcctga gcgatccgta ctcagaacgt ccaggagaga cgcatggccc gaagtcaaag
1501 tgctggaatt ttccaaaaca gcctgttctc tcctctctcc tccccagagc accccctgcc
1561 atcagggggg ttgaaatccc tctcccccag gagccctgct gctttgcttg gtggtagggc
1621 aggagagcaa acaaacagtc atggtctaaa acccacatag cactttgctc ttagttacat
1681 gtaaaatttt ggatttctaa aacaggtggg caatcatttt gaatactgtt ctgtgaccct
1741 gactgctagt tctgaggaca ctggtggctg tgctatgtgt ggccatcctc catgtcccgt
1801 ccctgtagct gctctgttta gacagcggac agacgctcac gcccagggga tgtcctcacg
1861 ctgtcgccgc gcggtttccc ttcgcagatg tgtatactca tgataggtca gaaagtgtat
1921 ccgctacaat aaagttctgg ttctaactaa aaaaaaaaaa aaaaaaaa
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