LOCUS AK225408 2843 bp mRNA linear HUM 17-NOV-2007 DEFINITION Homo sapiens mRNA for rhomboid family 1 variant, clone: HRC06404. ACCESSION AK225408 VERSION AK225408.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2843) AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Direct Submission JOURNAL Submitted (21-JUL-2006) to the DDBJ/EMBL/GenBank databases. Contact:Akiko Tanaka RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro, Tsurumi, Yokohama, Kanagawa 230-0045, Japan URL :http://protein.gsc.riken.jp/ REFERENCE 2 AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Homo sapiens protein coding cDNA. JOURNAL Published Only in Database(2006) REFERENCE 3 AUTHORS Maruyama,K. and Sugano,S. TITLE Oligo-capping : a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. JOURNAL Gene 138, 171-174 (1994) REFERENCE 4 AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S. TITLE Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library . JOURNAL Gene 200, 149-156 (1997) COMMENT This work was supported in part by the National Project on Protein Structural and Functional Analysis, Ministry of Education, Culture, Sports, Science and Technology of Japan. Sumio Sugano, Yutaka Suzuki Laboratory of Functional Genomics Department of Medical Genome Sciences Graduate School of Frontier Sciences The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan URL: http://www.k.u-tokyo.ac.jp/index.html.en FEATURES Location/Qualifiers source 1..2843 /cell_type="primary human renal epithelial cells" /clone="HRC06404" /clone_lib="HRC" /db_xref="H-InvDB:HIT000384538" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="this clone is also named as hss001001926" /organism="Homo sapiens" /tissue_type="kidney" misc_feature 113..2680 /product="rhomboid family 1 variant" BASE COUNT 505 a 957 c 847 g 534 t ORIGIN 1 gactcggcgc gggcgccctc ccggccagcg gcggcagccc ctcctccccg gcgccctcag 61 gaccccccag agacccccgg cggcggcagc ctgccttgct ctgccaggaa ccatgagtga 121 ggcccgcagg gacagcacga gcagcctgca gcgcaagaag ccaccctggc taaagctgga 181 cattccctct gcggtgcccc tgacggcaga agagcccagc ttcctgcagc ccctgaggcg 241 acaggctttc ctgaggagtg tgagtatgcc agccgagaca gcccacatct cttcacccca 301 ccatgagctc cggcggccgg tgctgcaacg ccagacgtcc atcacacaga ccatccgcag 361 ggggaccgcc gactggtttg gagtgagcaa ggacagtgac agcacccaga aatggcagcg 421 caagagcatc cgtcactgca gccagcgcta cgggaagctg aagccccagg tcctccggga 481 gctggacctg cccagccagg acaacgtgtc gctgaccagc accgagacgc cacccccact 541 ctacgtgggg ccatgccagc tgggcatgca gaagatcata gaccccctgg cccgtggccg 601 tgccttccgt gtggcagatg acactgcgga aggcctgagt gccccacaca ctcccgtcac 661 gccgggtgct gcctccctct gctccttctc cagctcccgc tcaggtttcc accggctccc 721 gcggcggcgc aagcgagagt cggtggccaa gatgagcttc cgggcggccg cagcgctgat 781 gaaaggccgc tccgttaggg atggcacctt tcgccgggca cagcgtcgaa gcttcactcc 841 agctagcttt ctggaggagg acacaactga tttccccgat gagctggaca catccttctt 901 tgcccgggaa ggtatcctcc atgaagagct gtccacatac ccggatgaag ttttcgagtc 961 cccatcggag gcagcgctaa aggactggga gaaggcaccg gagcaggcgg acctcaccgg 1021 cggggccctg gaccgcagcg agcttgagcg cagccacctg atgctgccct tggagcgagg 1081 ctggcggaag cagaaggagg gcgccgcagc cccgcagccc aaggtgcggc tccgacagga 1141 ggtggtgagc accgcggggc cgcgacgggg ccagcgtatc gcggtgccgg tgcgcaagct 1201 cttcgcccgg gagaagcggc cgtatgggct gggcatggtg ggacggctca ccaaccgcac 1261 ctaccgcaag cgcatcgaca gcttcgtcaa gcgccagatc gaggacatgg acgaccacag 1321 gcccttcttc acctactggc ttaccttcgt gcactcgctc gtcgccatcc tagccgtgtg 1381 catctatggc atcgcgcccg tgggcttctc gcagcatgag acggtggact cggtgctgcg 1441 gaaccgcggg gtctacgaga acgtcaagta cgtgcagcag gagaacttct ggatcgggcc 1501 cagctcggag gccctcatcc acctgggcgc caagttttcg ccctgcatgc gccaggaccc 1561 gcaggtgcac agcttcattc gctcggcgcg cgagcgcgag aagcactccg cctgctgcgt 1621 gcgcaacgac aggtcgggct gcgtgcagac ctcggaggag gagtgctcgt ccacgctggc 1681 agtgtgggtg aagtggccca tccatcccag cgccccagag cttgcgggcc acaagagaca 1741 gtttggctct gtctgccacc aggatcccag ggtgtgtgat gagccctcct ccgaagaccc 1801 tcatgagtgg ccagaagaca tcaccaagtg gccgatctgc accaaaaaca gcgctgggaa 1861 ccacaccaac catccccaca tggactgtgt catcacagga cggccctgct gcattggcac 1921 caagggcagg tgtgagatca cctcccggga gtactgtgac ttcatgaggg gctacttcca 1981 tgaggaggcc acgctctgct ctcaggtgca ctgcatggat gatgtgtgtg ggctcctgcc 2041 ttttctcaac cccgaggtgc ctgaccagtt ctaccgcctg tggctatccc tcttcctgca 2101 cgccgggatc ttgcactgcc tggtgtccat ctgcttccag atgactgtcc tgcgggacct 2161 ggagaagctg gcaggctggc accgcatagc catcatctac ctgctgagtg gtgtcaccgg 2221 caacctggcc agtgccatct tcctgccata ccgagcagag gtgggtcctg ctggctccca 2281 gttcggcatc ctggcctgcc tcttcgtgga gctcttccag agctggcaga tcctggcgcg 2341 gccctggcgt gccttcttca agctgctggc tgtggtgctc ttcctcttca cctttgggct 2401 gctgccgtgg attgacaact ttgcccacat ctcggggttc atcagtggcc tcttcctctc 2461 cttcgccttc ttgccctaca tcagctttgg caagttcgac ctgtaccgga aacgctgcca 2521 gatcatcatc tttcaggtgg tcttcctggg cctcctggct ggcctggtgg tcctcttcta 2581 cgtctatcct gtccgctgtg agtggtgtga gttcctcacc tgcatcccct tcactgacaa 2641 gttctgtgag aagtacgaac tggacgctca gctccactga gctggctgcg ggctccagcg 2701 gccgtgtgct ccagcaggcc agagccagac acgacctccc tgagcctcac aggcttacag 2761 gagtcacctg ctccatgtgg ggactggcct gtttcctgaa cacagacctc tttcttgtgc 2821 cttgttcact tctgttgaac ccc //