LOCUS AK225337 2470 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for leucine rich repeat containing 40 variant,
clone: HEP10410.
ACCESSION AK225337
VERSION AK225337.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2470)
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (21-JUL-2006) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Homo sapiens protein coding cDNA.
JOURNAL Published Only in Database(2006)
REFERENCE 3
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eukaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 4
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library .
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
Sumio Sugano, Yutaka Suzuki
Laboratory of Functional Genomics Department of Medical Genome
Sciences Graduate School of Frontier Sciences The University of
Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan
URL: http://www.k.u-tokyo.ac.jp/index.html.en
FEATURES Location/Qualifiers
source 1..2470
/cell_line="HepG2"
/cell_type="hepatoma"
/clone="HEP10410"
/clone_lib="HEP"
/db_xref="H-InvDB:HIT000384467"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hss001101584"
/organism="Homo sapiens"
/tissue_type="liver"
misc_feature 3..1457
/product="leucine rich repeat containing 40 variant"
BASE COUNT 847 a 392 c 401 g 830 t
ORIGIN
1 catcccttcc ttctgctata agagagctag aaaatcttca gaaacttaat gtcagccata
61 ataaactgaa aatactccct gaagaaatta caaacctaag aaacctgaag tgcctgtatc
121 tccagcataa tgaattaacc tgcatatcag agggatttga acaactttcc aatttagaag
181 atttagatct ttcaaacaat catcttacaa ctgttcctgc tagtttttct tctctgtcca
241 gtctggtgcg actcaatctt tctagtaatg aactgaagag tttgccagca gaaataaata
301 gaatgaaaag gttgaagcat ttggattgta attcaaatct cttggaaact atacctcctg
361 aattggctgg catggaatca ctagaattgc tttatttgcg gaggaataaa ttacgttttc
421 taccagaatt tccttcttgt agtctattga aggaattgca cgtaggtgaa aaccagattg
481 aaatgttaga ggcagaacat cttaaacatc tgaattcaat tcttgtgcta gacctgaggg
541 ataacaagtt aaaatctgtt ccagatgaaa ttatactact acggtccttg gaaaggcttg
601 acctaagcaa caatgatatt agtagtcttc cctattcatt ggggaacctt catttgaaat
661 ttttggcatt agaaggaaat cctttgagaa caattcgaag agaaattata agtaaaggaa
721 cacaagaagt cctaaaatat ctacgaagca cgatcaaaga tgatggacct agccaaagtg
781 agtctgctac tgagactgcc atgacactac caagtgaatc cagagtcaat atacatgcca
841 tcattacatt aaaaatatta gactatagtg ataaacaagc aactttgatt cctgatgagg
901 tgtttgatgc agtaaaaagc aacatcgtca cttctattaa cttcagtaag aatcaactat
961 gtgaaattcc aaaaaggatg gtagaactga aggaaatggt ttctgatgtc gatctcagtt
1021 ttaataaact ttcctttata tccttggagt tatgtgtgct tcagaaattg acttttttag
1081 atctcaggaa caatttttta aattctttgc cagaagaaat ggaatcactg gtaagactgc
1141 aaacgatcaa tctttccttt aataggttta aaatgctacc tgaagttcta tatcgtatct
1201 tcacacttga aacaattctg attagtaata atcaggttgg atctgtggac cctcagaaaa
1261 tgaagatgat ggaaaatctg accacgttgg accttcaaaa taatgacctc ttacaaattc
1321 caccagagct cggtaattgt gtaaacttaa gaacattact actggatgga aatccattcc
1381 gagttcctcg agcagccata ttaatgaaag gaacagctgc tatacttgaa tatttgagag
1441 accgaattcc tacttaacat ggagttgctt tataaccctt gtcatgtatt attaaccctg
1501 gttaattcta aggaggatgt aacatttgtt ttagtatcat cttaaaaggt gattattgta
1561 attgatcttg tagtttccca atatcaccta cccgttggta taattagcct gggccatatt
1621 cactgccagt aaatattttt acatttttat ttaagatttt tgtaaggtgt tgtatacatt
1681 tgtaatggtg ataaccacaa tgtgttcata catttgttct aaatgttttg catatgattt
1741 atcctgctaa ctttcatttt cttatagcaa gcagtttttt caaaaatgaa tttttattta
1801 atgtggttca gtattataat aacaaagcat ttttgtagaa ctggtttttt ttctcattta
1861 tttttgtatt ccatacaatg tgaccaattg acttgaatat gactagccag tttctatgtt
1921 tttgttagat ataaaattaa atcgaatttt gttgaatact gttctttggc atttaaaaaa
1981 taagaccttc ttatcttggg ccacatgtca aaagaaaaag gaaacaaaaa tatattaaaa
2041 ataagacttt tcattaccca tgataggact tttgtgatat ggctaatctc agtacacatt
2101 tcaacttaaa acctttttat ttacagcacc ataattttaa aatttacttg caatcttggt
2161 aagactaaac ttgcagtgtt tttctaaaag ggaatttgat ataggtaaac ttgatttaat
2221 aaaaattaaa tatcattttt gtttacacca aaattatcag aagtaggttg attagtcatt
2281 ataacactta ccatatgatt ctattaagaa gtcaattcag tagcatgtat atcaatttat
2341 atagataggt agatagcttt tggatgattg aggcatgctt atattatgaa aaaaattgct
2401 aataaagata aatactacat gttcagaata aaagttacat ttttcaaata ttgaaaaaaa
2461 aaaaaaaaaa
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