LOCUS AK225202 4665 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for Splice isoform 2 of Q9NQC7 variant, clone:
COL04245.
ACCESSION AK225202
VERSION AK225202.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4665)
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (21-JUL-2006) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Homo sapiens protein coding cDNA.
JOURNAL Published Only in Database(2006)
REFERENCE 3
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eukaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 4
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library .
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
Sumio Sugano, Yutaka Suzuki
Laboratory of Functional Genomics Department of Medical Genome
Sciences Graduate School of Frontier Sciences The University of
Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan
URL: http://www.k.u-tokyo.ac.jp/index.html.en
FEATURES Location/Qualifiers
source 1..4665
/clone="COL04245"
/clone_lib="COL"
/db_xref="H-InvDB:HIT000384332"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hss001000996"
/organism="Homo sapiens"
/tissue_type="colon"
misc_feature 396..2339
/product="Splice isoform 2 of Q9NQC7 variant"
BASE COUNT 1422 a 824 c 967 g 1452 t
ORIGIN
1 aggtgggggc gggcccaggt agcaggtttg gctgcgcggg ggccgcgcgt cggagtttcc
61 ccctttctag ggtgaggatg gttctacaca gccacccgga gttccttagt tgaaaggtgc
121 gccctgctgt gacagaatgt ggtaattgta atctttaaca ttttcatgta aaacatattt
181 cctgatcatc tttccattgt cttcatggaa aattgataaa tatttgtgcc ttccaactct
241 cgtcttggtt gaatgacttc atcttaatac aacatggaca ccacgttgct gaaaacatgc
301 tttgggactg ccactgaatt tatcttttgc ggttttatga caaagttatt agtagtttcc
361 cttttttgaa ttagtatttt gaagttaata tcacaatgag ttcaggctta tggagccaag
421 aaaaagtcac ttcaccctac tgggaagagc ggatttttta cttgcttctt caagaatgca
481 gcgttacaga caaacaaaca caaaagctcc ttaaagtacc gaagggaagt ataggacagt
541 atattcaaga tcgttctgtg gggcattcaa ggattccttc tgcaaaaggc aagaaaaatc
601 agattggatt aaaaattcta gagcaacctc atgcagttct ctttgttgat gaaaaggatg
661 ttgtagagat aaatgaaaag ttcacagagt tacttttggc aattaccaat tgtgaggaga
721 ggttcagcct gtttaaaaac agaaacagac taagtaaagg cctccaaata gacgtgggct
781 gtcctgtgaa agtacagctg agatctgggg aagaaaaatt tcctggagtt gtacgcttca
841 gaggacccct gttagcagag aggacagtct ccggaatatt ctttggagtt gaattgctgg
901 aagaaggtcg tggtcaaggt ttcactgacg gggtgtacca agggaaacag ctttttcagt
961 gtgatgaaga ttgtggcgtg tttgttgcat tggacaagct agaactcata gaagatgatg
1021 acactgcatt ggaaagtgat tacgcaggtc ctggggacac aatgcaggtc gaacttcctc
1081 ctttggaaat aaactccaga gtttctttga aggttggaga aacaatagaa tctggaacag
1141 ttatattctg tgatgttttg ccaggaaaag aaagcttagg atattttgtt ggtgtggaca
1201 tggataaccc tattggcaac tgggatggaa gatttgatgg agtgcagctt tgtagttttg
1261 cgtgtgttga aagtacaatt ctattgcaca tcaatgatat catcccagag agtgtgacgc
1321 aggaaaggag gcctcccaaa cttgccttta tgtcaagagg tgttggggac aaaggttcat
1381 ccagtcataa taaaccaaag gctacaggat ctacctcaga ccctggaaat agaaacagat
1441 ctgaattatt ttatacctta aatgggtctt ctgttgactc acaaccacaa cccaaatcaa
1501 aaaatacatg gtacattgat gaagttgcag aagaccctgc aaaatctctt acagagatat
1561 ctacagactt tgaccgttct tcaccaccac tccagcctcc tcctgtgaac tcactgacca
1621 ccgagaacag attccactct ttaccattca gtctcaccaa gatgcccaat accaatggaa
1681 gtattggcca cagtccactt tctctgtcag cccagtctgt aatggaagag ctaaacactg
1741 cacccgtcca agagagtcca cccttggcca tgcctcctgg gaactcacat ggtctagaag
1801 tgggctcatt ggctgaagtt aaggagaacc ctcctttcta tggggtaatc cgttggatcg
1861 gtcagccacc aggactgaat gaagtgctcg ctggactgga actggaagat gagtgtgcag
1921 gctgtacgga tggaaccttc agaggcactc ggtatttcac ctgtgccctg aagaaggcgc
1981 tgtttgtgaa actgaagagc tgcaggcctg actctaggtt tgcatcattg cagccggttt
2041 ccaatcagat tgagcgctgt aactctttag catttggagg ctacttaagt gaagtagtag
2101 aagaaaatac tccaccaaaa atggaaaaag aaggcttgga gataatgatt gggaagaaga
2161 aaggcatcca gggtcattac aattcttgtt acttagactc aaccttattc tgcttatttg
2221 cttttagttc tgttctggac actgtgttac ttagacccaa agaaaagaac gatgtagaat
2281 attatagtga aacccaagag ctactgagga cagaaattgt taatcctctg agaatgtaag
2341 tagaaaacaa attgctattt tgcctttaca tggtgttcta tttgctgttt tctggtatag
2401 taattaattt ataccttgtc ttcatgtaat aagagatggg tgaaaattag ttcttatggt
2461 aaaatattac gtttttaaac ctttggtcct tgtacttttt tgcttattta atttcttaaa
2521 tgtggccaag gtgtagaaca tagcatattc catgaaatga tttaacctat tttgctagag
2581 taaactataa tttagcaatt gcagtatgtt taggaaagct aatacataat acttaggatt
2641 cttatctttt gaaatagttt attccaacac ttctgctaca agtaatcatg cttattagtt
2701 aaattggtgt agtctagctt cttaaatctg aaagaaaagg agaaagggaa attctttata
2761 gaatagctag tgtttaatac tttggactag caacagatga gatgtatttt agtaccatat
2821 tttttggtta aaggaatata tttggcctct ttccacctgc cttaaaaagg tgattctttt
2881 tccatttcct actttaggaa ttataaatat gtctttttat ggccacagga agcaatttgt
2941 aatggtacaa gcacaagtga caggagatat ctagtaaaga ctttgaataa gtggtagtag
3001 tgatatgtga taatgtcaca ttataaaatt taaactatga agaattagga ccatagatca
3061 taaaacaaat ttgttcattc aggaatatag agagaaagtg atttatttaa agtccatatt
3121 aagataaatt tgaatccttt tatatactgt tcttatttat caattaaagt aaaaaatagt
3181 ttgatatcaa atttgaacca aaaaagcaga atactcaaat acaatgagga ttccaaatta
3241 tctgctatat cacatgacta ggaaagtaaa ttataagaga ataaatttcc tcacttatat
3301 cttttgcttt ctttaaattc tgtaatgatt tctctaatga tcttactctt taagataatt
3361 gtgaatcttg attttcacat caactatttt gtcttatgca aatttttaaa catacgattt
3421 ttttccccca agtaattgat actggaacaa gacaggtcaa acccgaaact ctaaggcatg
3481 ttaacacctc cttcctagaa gagaggaaga ataaacattc tttggatcct attgttcagc
3541 cagttaagaa tcatagttaa tcacactttc ttaccctgtc cacggtaagg aactggtcag
3601 atgccctgtt gtgatcagga ttccctgtgt ctgtagcatt catatctgta tatagctgac
3661 tggttttatt tggtgctgaa atctctgctt ttcttcagag accctgtctt tttaacctta
3721 ctcattttgt attcccagtg gctgacaggt tacgttacta tgtaagtggt agattctcag
3781 tctgtattgg ttgcaggaaa ctaatgagtg aatgaatagt ataaaaagtg gatataaaat
3841 tagctagttc tgacttgtcc ttagtaaact tatggtagcc gccaagttct cctctgaagc
3901 catttttaga attacaaatt taaagtgata ttaaactgat tgaatgtgtc ttgcattcag
3961 acaaagaaga gagaaaatgt catcattatg ccaattggtt tgattgcaga ttttagattt
4021 tcagtttctt ataaattccc tttcccattt cccttggtgg ctgtttcaca cttcagtatt
4081 aaaaggatat tctctctcaa aattgtatat tctgctttat aaagtaaatg ctttaatttc
4141 ccaagcaaat attatttaaa aaatcagtca cagcaaacct aaaaattttt tatcttagtg
4201 tatgacagtt acttgtagag catataatag tgtctaggat aattctggtt ctagatcttt
4261 aattttgcaa acttcaagaa gaagcttatc attgttttct tcaaaaataa ttgtctaacc
4321 tattgattta tgacatactg gagttgtata agaaatgtgt tggccaggtg tggtggcgca
4381 cacctgtaat cccagcactt tgggaggccg aggtgggcgg atcacttgag gccaggagtt
4441 caagagcagc ctggccaaca tggtgaaacc ctgtttctac taaaaataca aaaattagct
4501 ggatgtggtg gtgcacgcct gtaattccag ctactttggt ggctgaggca tgagaatctc
4561 ttgagcctgg aaggcggagg ttgcagtgag ctgagatcgg gccactgcac actccagcct
4621 gagtgataga gtgagactct atctcaaaaa aaaaaaaaaa aaaaa
//