LOCUS AK225168 2183 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for DEP domain containing 6 variant, clone:
CBR02362.
ACCESSION AK225168
VERSION AK225168.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2183)
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (21-JUL-2006) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Homo sapiens protein coding cDNA.
JOURNAL Published Only in Database(2006)
REFERENCE 3
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eukaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 4
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library .
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
Sumio Sugano, Yutaka Suzuki
Laboratory of Functional Genomics Department of Medical Genome
Sciences Graduate School of Frontier Sciences The University of
Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan
URL: http://www.k.u-tokyo.ac.jp/index.html.en
FEATURES Location/Qualifiers
source 1..2183
/clone="CBR02362"
/clone_lib="CBR"
/db_xref="H-InvDB:HIT000384298"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hss001000845"
/organism="Homo sapiens"
/tissue_type="brain"
misc_feature 126..1355
/product="DEP domain containing 6 variant"
BASE COUNT 627 a 487 c 552 g 517 t
ORIGIN
1 agtcagagca gcggagctgc cccgaacaaa gatggcgcgg gaagcgtctg tgagggcaga
61 ctgatccgag cacccaaacc ctcggcggac agcggagcca gtggtagccg cacggcccta
121 aaaccatgga ggagggcggc agcactggca gtgctggcag tgacagcagc accagcggga
181 gtggcggggc gcagcaaagg gagctggagc gcatggctga ggtcttggtc accggggaac
241 agctacggct caggctgcac gaagaaaagg ttattaaaga tagacgtcat catctcaaga
301 cctacccaaa ctgttttgtc gcaaaagaac tgattgactg gctgattgaa cacaaagagg
361 cttctgacag agagacggca attaaactca tgcagaaatt agcagaccgg ggcattattc
421 accatgtgtg tgatgagcat aaggaattca aggatgtcaa actcttctac cgctttagaa
481 aggatgacgg caccttccca ttggataatg aagtgaaggc ctttatgaga ggacagaggc
541 tatatgaaaa gctgatgagc cctgaaaaca cactcctgca gcccagggag gaggaagggg
601 tcaagtatga gcgcaccttc atggcatctg aattcctgga ctggctggtt caggaaggtg
661 aggccaccac gaggaaagag gcagagcagc tttgccaccg gcttatggag catggcatca
721 tccagcatgt gtccagcaag cacccatttg tggacagcaa tcttctctac cagttcagaa
781 tgaacttccg gcggaggcga agactgatgg agctgctcaa tgaaaagtcc ccctcctccc
841 aggaaactca tgacagtccc ttctgcctga ggaagcagag ccatgacaat cggaaatcta
901 ccagctttat gtcagtgagc cccagcaagg agatcaagat cgtgtctgca gtgaggagaa
961 gcagcatgag cagctgtggc agcagcggct acttcagcag cagccccacc ctcagcagca
1021 gcccccctgt gctctgcaac cccaagtccg tgctgaagag acctgtcacc tctgaggaac
1081 tccttactcc cggggctccg tatgcaagga agacattcac gattgttggt gacgcggttg
1141 gctggggttt tgtggtgcga ggaagtaagc catgccacat ccaggctgta gaccccagtg
1201 gccctgcagc cgcagcagga atgaaggtct gtcagtttgt cgtctctgtc aacgggctca
1261 atgtcctgca tgtagactac cggaccgtga acaatctgat tctgacgggc ccacggacga
1321 ttgtcatgga agtcatggag gagttagagt gctgagctcc tgggcctccc agccctccag
1381 tggcctgtgg gtgagggaag ccagaatgac acaaagcaat gcaaagacaa gattgccatg
1441 caaatggatg gttttggaca tacgagtctt ctccgcacat acatgtctga agttgagttt
1501 tatacactga atgtggaaga accgggtatc atatcttttt taaaaatgtc agtgtagaaa
1561 acatttggga aaccattttc ctacatgata gaactgcctt actagatttc tatttgtagc
1621 tctcattcat tgttttttat cttagtttgc agaaaggtgt tgaaatgctt ctctagccca
1681 aacagcgaca tgctaaagtc cccttcttca gagtcaatag agtagttgtt aaaggtttta
1741 aattgtactt tctccaaaat tagcatgcag ctatttaata gggaatctag atttcaccaa
1801 gattcaaatc aaagcaacat ttaaaggaat aagacctgtt cactagcatt ttcaaggggg
1861 ttctaaagca ttcaagtgct taaaagccat aaaaaatgac ttcttaattc ctgcctttag
1921 tgtcaacttt taagttaata caggtttcaa ttgtggcatt aggaaaaaaa aaaccttgtg
1981 atgctatggt tgggggtagt tagggagaga ctacatgaaa ttgtgtgccc ctattttctt
2041 tctgatccta aatcattttg ttttataaat cagctacagc atctttctag aattaatcct
2101 gaatatgttg aatgttaaaa tagagaagtt tgtatataca cataattaaa aatcaaccct
2161 tctggcaaaa aaaaaaaaaa aaa
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