LOCUS AK223628 4127 bp mRNA linear HUM 26-APR-2005
DEFINITION Homo sapiens mRNA for Protein KIAA0196 variant, clone: FCC134H04.
ACCESSION AK223628
VERSION AK223628.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4127)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and
Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eucaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 3
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library.
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
FEATURES Location/Qualifiers
source 1..4127
/clone="FCC134H04"
/clone_lib="TYB_SPL"
/db_xref="H-InvDB:HIT000331408"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hst001001443"
/organism="Homo sapiens"
/tissue_type="Spleen"
CDS <263..3757
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="Protein KIAA0196 variant"
/protein_id="BAD97348.1"
/translation="SVRLTMLDFLAENNLCGQAILRIVSCGNAIIAELLRLSEFIPAV
FRLKDRADQQKYGDIIFDFSYFKGPELWESKLDAKPELQDLDEEFRENNIEIVTRFYL
AFQSVHKYIVDLNRYLDDLNEGVYIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQ
KIEGEVRERMLVSYYRYSAARSSADSNMDDICKLLRSTGYSSQPGAKRPSNYPESYFQ
RVPINESFISMVIGRLRSDDIYNQVSAYPLPEHRSTALANQAAMLYVILYFEPSILHT
HQAKMREIVDKYFPDNWVISIYMGITVNLVDAWEPYKAAKTALNNTLDLSNVREQASR
YATVSERVHAQVQQFLKEGYLREEMVLDNIPKLLNCLRDCNVAIRWLMLHTADSACDP
NNKRLRQIKDQILTDSRYNPRILFQLLLDTAQFEFILKEMFKQMLSEKQTKWEHYKKE
GSERMTELADVFSGVKPLTRVEKNENLQAWFREISKQILSLNYDDSTAAGRKTVQLIQ
ALEEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINIKEEVLITMQIVGDLSFAWQLI
DSFTSIMQESIRVNPSMVTKLRATFLKLASALDLPLLRINQANSPDLLSVSQYYSGEL
VSYVRKVLQIIPESMFTSLLKIIKLQTHDIIEVPTRLDKDKLRDYAQLGPRYEVAKLT
HAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAFALHRGLIFNPRAKPS
ELMPKLKELGATMDGFHRSFEYIQDYVNIYGLKIWQEEVSRIINYNVEQECNNFLRTK
IQDWQSMYQSTHIPIPKFTPVDESVTFIGRLCREILRITDPKMTCHIDQLNTWYDMKT
HQEVTSSRLFSEIQTTLGTFGLNGLDRLLCFMIVKELQNFLSMFQKIILRDRTVQDTL
KTLMNAVSPLKSIVANSNKIYFSAIAKTQKIWTAYLEAIMKVGQMQILRQQIANELNY
SCRFDSKHLAAALENLNKALLADIEAHYQDPSLPYPKEDNTLLYEITAYLEAAGIHNP
LNKIYITTKRLPYFPIVNFLFLIAQLPKLQYNKNLGMVCRKPTDPVDWPPLVLGLLTL
LKQFHSRYTEQFLALIGQFICSTVEQCTSQKIPEIPADVVGALLFLEDYVRYTKLPRR
VAEAHVPNFIFDEFRTVL"
BASE COUNT 1245 a 888 c 873 g 1121 t
ORIGIN
1 agtcaggggc ggaagtcggg gtctgacccg ctccaggtcc gggactgcgg atagaagagg
61 accgccgcct tgagggaggg gtggaaactg ggtgccggct ccgcgcgcga cctccggccc
121 tgcgcgtgcg ccgtggcgcg gcccggctga caggttcttt aatggaggag ccaatctctc
181 tgcacacctg gtttcatcta ataatataca gacaccagct ctgaggccag ttaatcatcc
241 ccagtgtcca ggcacagagt agtcggtccg cctcacaatg ttggactttc tagccgagaa
301 caacctctgt ggccaagcaa tcctaaggat tgtttcctgt ggtaatgcca tcattgctga
361 acttttgaga ctctctgagt ttattcctgc tgtgttcagg ttaaaagaca gagctgatca
421 acagaaatat ggagatatca tatttgattt cagctatttt aagggtccag aattatggga
481 aagcaaactg gatgctaagc cagagctaca ggatttagat gaagaatttc gtgaaaacaa
541 catagaaatt gtgaccagat tttatttagc atttcaaagt gtacataaat atattgtaga
601 cttaaacaga tatctagatg atctcaatga aggggtttat attcagcaaa ccttagaaac
661 tgtgcttctc aatgaagatg gaaaacaact tctatgtgaa gcactgtact tatatggagt
721 tatgctactg gtcattgacc aaaagattga aggagaagtc agagagagga tgctggtttc
781 ttactaccga tacagtgctg ctcgatcttc tgctgattca aatatggacg atatttgtaa
841 gctgcttcga agtacaggtt attctagcca accaggtgcc aaaagaccat ccaactatcc
901 cgagagctat ttccagagag tgcctatcaa cgaatccttc atcagtatgg tcattggtcg
961 actgagatct gatgatattt acaaccaggt ctcagcgtat cctttgccgg agcatcgcag
1021 cacagccctg gcaaaccaag ctgccatgct gtacgtgatt ctctactttg agccttccat
1081 ccttcacacc catcaagcaa aaatgagaga gatagtggat aaatactttc cagataattg
1141 ggtaattagt atttacatgg ggatcacagt taatctagta gatgcttggg aaccttacaa
1201 agctgcaaaa actgctttaa ataataccct ggacctttca aatgtcagag aacaggcaag
1261 cagatatgct actgtcagtg aaagagtgca tgctcaagtg cagcaatttc taaaagaagg
1321 ttatttaagg gaggagatgg ttctggacaa tatcccaaag cttctgaact gcctgagaga
1381 ctgcaatgtt gccatccgat ggctgatgct tcatacagca gactcagcct gtgacccaaa
1441 caacaaacgc cttcgtcaaa tcaaggacca gattctaaca gactctcggt acaatcccag
1501 gatcctcttc cagctgctgt tagatactgc acaatttgag tttatactca aagagatgtt
1561 caagcaaatg ctttcagaaa agcaaaccaa atgggagcat tacaagaaag agggttcgga
1621 gcggatgact gagcttgctg atgtcttttc aggagtgaaa cccctaacca gagtggagaa
1681 aaatgaaaac cttcaagctt ggttcagaga gatctcaaaa caaatattgt ctttaaatta
1741 tgatgattct actgctgcgg gcagaaaaac tgtacaactg atacaagctt tggaagaggt
1801 tcaagaattc caccagttgg aatccaatct gcaagtatgt cagtttcttg ccgatactcg
1861 aaagtttctt catcaaatga tcagaaccat taacattaaa gaggaggttc tgatcacaat
1921 gcagatcgtt ggggaccttt ctttcgcttg gcagttgatt gacagtttca catccatcat
1981 gcaagaaagc ataagggtaa atccatccat ggttactaaa ctcagagcta ccttcctaaa
2041 gcttgcctct gccctcgatc tgccccttct tcgtattaat caggcaaata gccccgacct
2101 gctcagcgtg tcacagtact attctggaga gttggtatcc tatgtgagaa aagttttgca
2161 gatcatccca gaaagcatgt ttacatctct tctaaagatc ataaagcttc agacccacga
2221 cattattgaa gtgcctaccc gcctggacaa agacaagctg agggactatg ctcagctagg
2281 cccacgatac gaggttgcca agcttactca tgctatttcc atttttactg aaggcatctt
2341 aatgatgaaa acgactttgg ttggcatcat caaggtggat ccaaagcagt tgctggaaga
2401 tggaataagg aaagagcttg tgaagcgcgt tgcctttgcc ctgcataggg gactgatatt
2461 caaccctcga gccaagccaa gtgaattgat gcccaagctg aaagagttgg gagcgaccat
2521 ggatggattc catcgttctt ttgaatacat acaggactat gtcaacattt atggtctgaa
2581 gatttggcag gaagaagtat ctcgtatcat aaattacaac gtggagcaag agtgtaataa
2641 ctttctaaga acgaagattc aagattggca aagcatgtac cagtccactc atattccaat
2701 acccaagttt acccctgtgg atgagtctgt aacgtttatt ggtcgactct gcagagaaat
2761 cctgcggatc acagacccaa aaatgacatg tcacatagac cagctgaaca cttggtatga
2821 tatgaaaact catcaggaag tgaccagcag ccgcctcttc tcagaaatcc agaccacctt
2881 gggaaccttt ggtctaaatg gcttagacag gcttctgtgc tttatgattg taaaagagtt
2941 acagaatttc ctcagtatgt ttcagaaaat tatcctgaga gacagaactg ttcaggacac
3001 tttaaaaacc ctcatgaatg ctgtcagtcc cctaaaaagt attgtcgcaa attcaaataa
3061 aatttatttt tccgccattg ccaaaacaca gaagatttgg actgcgtatc tcgaggctat
3121 aatgaaggtt gggcagatgc agattctgag acaacagatt gccaatgaat taaattattc
3181 ttgtcggttt gattctaaac atctggcagc tgctctggag aatctcaata aggctctcct
3241 agcagacatt gaagcccact atcaggaccc ttcacttcct taccccaaag aagataacac
3301 acttttatat gaaatcacag cctatctgga ggcagctggc attcacaacc cactgaataa
3361 gatatacata acaacaaagc gcttacccta ttttccaatt gtaaactttc tatttttgat
3421 cgctcagttg ccaaaacttc aatacaacaa aaatctggga atggtctgcc gaaaaccgac
3481 cgacccggtt gattggccac cacttgtcct gggactgctc actctgctga agcagttcca
3541 ttcccggtac accgagcagt tcctggcgct tattggccag tttatctgct ccacggtgga
3601 gcagtgtaca agccagaaga tacctgaaat tcctgcagat gttgtgggtg cccttctgtt
3661 cctggaggat tatgttcggt acacaaagct acccaggagg gttgctgaag cacatgtgcc
3721 taatttcatt tttgatgagt tcagaacagt gctgtaactg tttttcctac ttcttcaatg
3781 gaaggattgt ccttagatct tcccaccatc acaaatgaat ttgaagatga aaagaaactc
3841 agttgctcat acaactgcat tttttctgtc tattatggga aacatcagac gttctgagta
3901 agatatatct catggcatta gttaatataa ctgatattgt ttaaatcatg gtattacatg
3961 caatttatat cagataaaag cagaacacat ttttgtactg cctctcttaa atgctgaatg
4021 taactgttat gtataaatcc atttagtttt atgttctaaa gaactatttg tgcaactcca
4081 gattttcagt aaaatagtat tactagtaaa aaaaaaaaaa aaaaaaa
//