LOCUS AK223615 3101 bp mRNA linear HUM 26-APR-2005
DEFINITION Homo sapiens mRNA for Transcription initiation factor TFIID
subunit 5 variant, clone: FCC133F11.
ACCESSION AK223615
VERSION AK223615.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3101)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and
Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eucaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 3
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library.
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
FEATURES Location/Qualifiers
source 1..3101
/clone="FCC133F11"
/clone_lib="TYB_BRN"
/db_xref="H-InvDB:HIT000331395"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hst001001383"
/organism="Homo sapiens"
/tissue_type="Brain"
CDS <1..2412
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="Transcription initiation factor TFIID subunit 5
variant"
/protein_id="BAD97335.1"
/translation="SRKMAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSGGTTN
NGPNGGGGNVAASSSTGGDGGTPKPTVAVSAAAPAGAAPVPAAAPDAGAPHDRQTLLA
VLQFLRQSKLREAEEALRREAGLLEETVAGAGAPGEVDSAGAEVTSALLSRVTASAPG
PAAPDPPGTGASGATVVSGSASGPAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYE
EYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQEC
YYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWN
IVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKSKVFFGLLKEPEIEVPLDDE
DEEGENEEGKPKKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMNMKET
TKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLR
SVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSE
DGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR
IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP
NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL
WDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVLAAG
AYSPQ"
BASE COUNT 869 a 663 c 776 g 793 t
ORIGIN
1 agccgcaaga tggcggcgct ggcggaggag cagacggagg tggcggtcaa gctagagcct
61 gagggaccgc caacgctgct acctccgcag gcgggggacg gcgcaggcga gggtagcggc
121 ggcactacca acaacggccc caacggcggc ggcgggaacg ttgcggcgtc gtcgtccact
181 ggcggggatg gcgggacccc caagcccacg gtggctgtct ccgccgctgc cccggcgggg
241 gcggccccgg tgcccgccgc tgctccggac gccggcgctc cgcatgaccg acagactcta
301 ctggccgtgc tgcagttcct acggcagagc aaactccgcg aggccgaaga ggcgctgcgc
361 cgtgaggccg ggctgctgga ggagacagtg gcgggcgccg gagccccggg agaggtggac
421 agcgccggcg ctgaggtgac cagcgcgctt ctcagccggg tgaccgcctc ggcccctggc
481 cctgcggccc ccgaccctcc gggcactggc gcttcggggg ccacggtcgt ctcaggttca
541 gcctcaggtc ctgcggctcc gggtaaagtt ggaagtgttg ctgtggaaga ccagccagat
601 gtcagtgccg tgttgtcagc ctacaaccaa caaggagatc ccacaatgta tgaagaatac
661 tatagtggac tgaaacactt cattgaatgt tccctggact gccatcgggc agagttgtcc
721 caactttttt atcctctgtt tgtgcacatg tacttggagc tagtctacaa tcaacatgag
781 aatgaagcaa agtcattctt tgagaagttc catggagatc aggaatgtta ttaccaggat
841 gacctacgag tattatctag tcttaccaaa aaggaacaca tgaaagggaa tgagaccatg
901 ttggattttc gaacaagtaa atttgttctg cgtatttccc gtgactcgta ccaactcttg
961 aagaggcatc ttcaggagaa acagaacaat cagatatgga acatagttca ggagcacctc
1021 tacattgaca tctttgatgg gatgccgcgt agtaagcaac agatagatgc gatggtggga
1081 agtttggcag gagaggctaa acgagaggca aacaaatcaa aggtattttt tggtttatta
1141 aaagaaccag aaattgaggt acctttggat gacgaggatg aagagggaga aaatgaagaa
1201 ggaaaaccta aaaagaagaa gcctaaaaaa gatagtattg gatccaaaag caaaaaacaa
1261 gatcccaatg ctccacctca gaacagaatc cctcttcctg agttgaaaga ttcagataag
1321 ttggataaga taatgaatat gaaagaaacc accaaacgag tgcgccttgg gccggactgc
1381 ttaccctcca tttgtttcta tacatttctc aatgcttacc agggtctcac tgcagtggat
1441 gtcactgatg attctagtct gattgctgga ggttttgcag attcaactgt cagagtgtgg
1501 tcggtaacac ccaaaaagct tcgtagtgtc aaacaagcat cagatcttag tcttatagac
1561 aaagaatcag atgatgtctt agaaagaatc atggatgaga aaacagcaag tgagttgaag
1621 attttgtatg gtcacagtgg gcctgtctac ggagccagct tcagtccgga taggaactat
1681 ctgctttcct cttcagagga cggaactgtt agattgtgga gccttcaaac atttacttgt
1741 ttggtgggat ataaaggaca caactatcca gtatgggaca cacaattttc tccatatgga
1801 tattattttg tgtcaggggg ccatgaccga gtagctcggc tctgggctac agaccactat
1861 cagcctttaa gaatatttgc cggccatctt gctgatgtga attgtaccag attccatcca
1921 aattctaatt atgttgctac gggctctgca gacagaactg tgcggctctg ggacgtcctg
1981 aatggtaact gtgtaaggat cttcactgga cacaagggac caattcattc cttgacattt
2041 tctcccaatg ggagattcct ggctacagga gcaacagatg gcagagtgct tctttgggat
2101 attggacatg gtttgatggt tggagaatta aaaggccaca ctgatacagt ctgttcactt
2161 aggtttagta gagatggtga aattttggca tcaggttcaa tggataatac agttcgatta
2221 tgggatgcta tcaaagcctt tgaagattta gagaccgatg actttactac agccactggg
2281 catataaatt tacctgagaa ttcacaggag ttattgttgg gaacatatat gaccaaatca
2341 acaccagttg tacaccttca ttttactcga agaaacctgg ttctagctgc aggagcttat
2401 agtccacaat aaaccatcgg tattaaagac cttttggaag ctactgtttt taaaaaggga
2461 gactaaaagc aaatacctca gtgattaata tttaagctac agagaatgtt tttgtctata
2521 tggatctgga agtatgctgc ttggaaaaat ctgaacagga cagttccacg tttctatagc
2581 aaccacattt gactaatttc cgttagttga ataagaggta ttatgatcat ggaggggaca
2641 tttatggtgc tttggattgt gtggaaacta tgcattttct gttcaaatgc tattttaatt
2701 tattacattt agaaaaaaag ttgatttcaa taattcatcc tgcttcaaga ttcaaattca
2761 gaaatatact atcatcttga attttagctg aagaatccta tgagcatgta tgtttctgct
2821 gtaaaaacgt agttactgta tggcactcaa aaactatgtt aaatgatcca ctaacttttt
2881 ttttcttggc ccatgattaa tggaatgtat gtaactaggt agggttcctt tcttagatct
2941 agaggaagta cagccaccca ctgacatctg aatttatata cctgttgagt tttgagtgca
3001 cccaaacact cgataaacca ggtgaagaaa tttagcttcc atgttctact tcagctaaaa
3061 cagctacata caacctagta cacttgaagt cagacagaca t
//