LOCUS AK223547 2057 bp mRNA linear HUM 26-APR-2005
DEFINITION Homo sapiens mRNA for GATA binding protein 6 variant, clone:
FCC126D11.
ACCESSION AK223547
VERSION AK223547.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2057)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and
Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eucaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 3
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library.
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
FEATURES Location/Qualifiers
source 1..2057
/clone="FCC126D11"
/clone_lib="TYB_KID"
/db_xref="H-InvDB:HIT000331327"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hst001000969"
/organism="Homo sapiens"
/tissue_type="kidney"
CDS <213..2000
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="GATA binding protein 6 variant"
/protein_id="BAD97267.1"
/translation="MALTDGGWCLPKRFGAAGADASDSRAFPAREPSTPPSPISSSSS
SCSRGGERGPGGASNCGTPQLDTEAAAGPPARSLLLSSYASHPFGAPHGPSAPGVAGP
GGNLSSWEDLLLFTDLDQAATASKLLWSSRGAKLSPFAPEQPEEMYQTLAALSSQGPA
AYDGAPGGFVHSAAAAAAAAAAASSPVYVPTTRVGSMLPGLPYHLQGSGSGPANHAGG
AGAHPGWPQASADSPPYGSGGGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAA
REPGGYAAAGNGGAGGVSGGGSSLAAMGGREPQYSSLSAARPLNGTYHHHHHHHHHHP
SPYSPYVGAPLTPAWPAGPFETPVLHSLQSRAGAPLPVPRGPSADLLEDLSESRECVN
CGSIQTPLWRRDGTGHYLCNACGLYSKMNGLSRPLIKPQKRVPSSRRLGLSCANCHTT
TTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKEGIQTRKRKPKNINKSKTCSGNS
NNSIPMTPTSTSSNSDDCSKNTSPTTQPTASGAGAPVMTGAGESTNPENSELKYSGQD
GLYIGVSLASPAEVTSSVRPDSWCALALA"
BASE COUNT 356 a 749 c 644 g 308 t
ORIGIN
1 attgatctcc acgcccgggg cagaaatagg atctttgaga agtctcaaat gggatctttg
61 agaagtcaga tcccatttga actagaaaaa ggagtggagg cgaggtagcg tgcagcctac
121 gctcttgtta acccgtcgat ctcctaccat acccgtctcc cccaccccac ctcaggagct
181 agacgtcagc ttggagcggc gccggaccgt ggatggcctt gactgacggc ggctggtgct
241 tgccgaagcg cttcggggcc gcgggtgcgg acgccagcga ctccagagcc tttccagcgc
301 gggagccctc cacgccgcct tcccccatct cttcctcgtc ctcctcctgc tcccggggcg
361 gagagcgggg ccccggcggc gccagcaact gcgggacgcc tcagctcgac acggaggcgg
421 cggccggacc cccggcccgc tcgctgctgc tcagttccta cgcttcgcat cccttcgggg
481 ctccccacgg accttcggcg cctggggtcg cgggccccgg gggcaacctg tcgagctggg
541 aggacttgct gctgttcact gacctcgacc aagccgcgac cgccagcaag ctgctgtggt
601 ccagccgcgg cgccaagctg agccccttcg cacccgagca gccggaggag atgtaccaga
661 ccctcgccgc tctctccagc cagggtccgg ccgcctacga cggcgcgccc ggcggcttcg
721 tgcactctgc ggccgcggcg gcagcagccg cggcggcggc cagctccccg gtctacgtgc
781 ccaccacccg cgtgggttcc atgctgcccg gcctaccgta ccacctgcag gggtcgggca
841 gtgggccagc caaccacgcg ggcggcgcgg gcgcgcaccc cggctggcct caggcctcgg
901 ccgacagccc tccatacggc agcggaggcg gcgcggctgg cggcggggcc gcggggcctg
961 gcggcgctgg ctcagccgcg gcgcacgtct cggcgcgctt cccctactct cccagcccgc
1021 ccatggccaa cggcgccgcg cgggagccgg gaggctacgc ggcggcgggc aatgggggcg
1081 cgggaggcgt gagcggcggc ggcagtagcc tggcggccat gggcggccgc gagccccagt
1141 acagctcgct gtcggccgcg cggccgctga acgggacgta ccaccaccac caccaccacc
1201 accaccacca tccgagcccc tactcgccct acgtgggggc gccactgacg cctgcctggc
1261 ccgccggacc cttcgagacc ccggtgctgc acagcctgca gagccgcgcc ggagccccgc
1321 tcccggtgcc ccggggtccc agtgcagacc tgctggagga cctgtccgag agccgcgagt
1381 gcgtgaactg cggctccatc cagacgccgc tgtggcggcg ggacggcacc ggccactacc
1441 tgtgcaacgc ctgcgggctc tacagcaaga tgaacggcct cagccggccc ctcatcaagc
1501 cgcagaagcg cgtgccttca tcacggcggc ttggattgtc ctgtgccaac tgtcacacca
1561 caactaccac cttatggcgc agaaacgccg agggtgaacc cgtgtgcaat gcttgtggac
1621 tctacatgaa actccatggg gtgcccagac cacttgctat gaaaaaagag ggaattcaaa
1681 ccaggaaacg aaaacctaag aacataaata aatcaaagac ttgctctggt aatagcaata
1741 attccattcc catgactcca acttccacct cttctaactc agatgattgc agcaaaaata
1801 cttcccccac aacacaacct acagcctcag gggcgggtgc cccggtgatg actggtgcgg
1861 gagagagcac caatcccgag aacagcgagc tcaagtattc gggtcaagat gggctctaca
1921 taggcgtcag tctcgcctcg ccggccgaag tcacgtcctc cgtgcgaccg gattcctggt
1981 gcgccctggc cctggcctga gcccacgccg ccaggaggca gggagggctc cgccgcgggc
2041 ctcactccac tcgtgtc
//