LOCUS AK223536 1389 bp mRNA linear HUM 26-APR-2005
DEFINITION Homo sapiens mRNA for SRY (sex determining region Y)-box 5 isoform
c variant, clone: FCC125A06.
ACCESSION AK223536
VERSION AK223536.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1389)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and
Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eucaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 3
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library.
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
FEATURES Location/Qualifiers
source 1..1389
/clone="FCC125A06"
/clone_lib="IMS_TST"
/db_xref="H-InvDB:HIT000331316"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hst001000881"
/organism="Homo sapiens"
/tissue_type="testis"
CDS <61..1194
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="SRY (sex determining region Y)-box 5 isoform c
variant"
/protein_id="BAD97256.1"
/translation="MHDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLK
ASVPAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLG
LNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRES
RGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQP
YYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNV
GQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEP
HIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDNENHIAGQAN"
BASE COUNT 440 a 321 c 344 g 284 t
ORIGIN
1 aaacagtcag ttatagtggg ttcaccagac tgttggagat ttgtgccata ggagctgtgc
61 atgcatgatg aagtggcaca gccactgaac ctatcagcta aacccaagac ctctgatggc
121 aaatcaccca catcacccac ctctccccat atgccagctc tgagaataaa cagtggggca
181 ggccccctca aagcctctgt cccagcagcg ttagctagtc cttcagccag agttagcaca
241 ataggttact taaatgacca tgatgctgtc accaaggcaa tccaagaagc tcggcaaatg
301 aaggagcaac tccgacggga acaacaggtg cttgatggga aggtggctgt tgtgaatagt
361 ctgggtctca ataactgccg aacagaaaag gaaaaaacaa cactggagag tctgactcag
421 caactggcag ttaaacagaa tgaagaagga aaatttagcc atgcaatgat ggatttcaat
481 ctgagtggag attctgatgg aagtgctgga gtctcagagt caagaattta tagggaatcc
541 cgagggcgtg gtagcaatga accccacata aagcgtccaa tgaatgcctt catggtgtgg
601 gctaaagatg aacggagaaa gatccttcaa gcctttcctg acatgcacaa ctccaacatc
661 agcaagatat tgggatctcg ctggaaagct atgacaaacc tagagaaaca gccatattat
721 gaggagcaag cccgtctcag caagcagcac ctggagaagt accctgacta taagtacaag
781 cccaggccaa agcgcacctg cctggtggat ggcaaaaagc tgcgcattgg tgaatacaag
841 gcaatcatgc gcaacaggcg gcaggaaatg cggcagtact tcaatgttgg gcaacaagca
901 cagatcccca ttgccactgc tggtgttgtg taccctggag ccatcgccat ggctgggatg
961 ccctcccctc acctgccctc ggagcactca agcgtgtcta gcagcccaga gcctgggatg
1021 cctgttatcc agagcactta cggtgtgaaa ggagaggagc cacatatcaa agaagagata
1081 caggccgagg acatcaatgg agaaatttat gatgagtacg acgaggaaga ggatgatcca
1141 gatgtagatt atgggagtga caatgaaaac catattgcag gacaagccaa ctgataaggg
1201 tcaaaagatt gttgtgacct taggacttaa agaagcccta actggttcat ccttaccagt
1261 ggccaagcac attaactttc tcatacactg actgttactt taactgttag tcttaaatag
1321 ttgggacatc agctgactaa tagacctcag cctcaaaagg cttggaaaaa aaaaaaaaaa
1381 aaggccaca
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