LOCUS AK223525 2432 bp mRNA linear HUM 26-APR-2005
DEFINITION Homo sapiens mRNA for myotubularin-related protein 9 variant,
clone: FCC123F12.
ACCESSION AK223525
VERSION AK223525.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2432)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and
Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eucaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 3
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library.
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
FEATURES Location/Qualifiers
source 1..2432
/cell_line="KATOIII"
/clone="FCC123F12"
/clone_lib="IMS_KAT"
/db_xref="H-InvDB:HIT000331305"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hst001000826"
/organism="Homo sapiens"
CDS <83..1732
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="myotubularin-related protein 9 variant"
/protein_id="BAD97245.1"
/translation="MEFAELIKTPRVDNVVLHRPFYPAVEGTLCLTGHHLILSSRQDN
TEELWLLHSNIDAIDKRFVGSLGTIIIKCKDFRIIQLDIPGMEECLNIASSIEALSTL
DSITLMYPFFYRPMFEVIEDGWHSFLPEQEFELYSSATSEWRLSYVNKEFAVCPSYPP
IVTVPKSIDDEALRKVATFRHGGRFPVLSYYHKRNGMVIMRSGQPLTGTNGRRCKEDE
KLINATLRAGKRGYIIDTRSLNVAQQTRAKGGGFEQEAHYPQWRRIHKSIERYHILQE
SLIKLVEACNDQTHNMDRWLSKLEASNWLTHIKEILTTACLAAQCIDREGASILIHGT
EGTDSTLQVTSLAQIILEPRSRTIRGFEALIEREWLQAGHPFQQRCAQSAYCNTKQKW
EAPVFLLFLDCVWQILRQFPCSFEFNENFLIMLFEHAYASQFGTFLGNNESERCKLKL
QQKTMSLWSWVNQPSELSKFTNPLFEANNLVIWPSVAPQSLPLWEGIFLRWNRSSKYL
DEAYEEMVNIIEYNKELQAKVNILRRQLAELETEDGMQESP"
BASE COUNT 653 a 549 c 562 g 668 t
ORIGIN
1 gtgtttccgc tacttccctg cggcggggta accgcctcgc acctaccggg ctcggttccc
61 tggctccggc cgcgggggga gcatggagtt tgcggagctg attaagaccc cgcgggtgga
121 caatgtggtg ctgcaccggc ctttctaccc ggctgtcgag ggcaccctgt gcctgacggg
181 ccaccacttg atcctgtcct cccggcagga caatacggag gagctgtggc tcctccattc
241 aaacatcgac gccatcgaca agcgatttgt aggatcactg ggtaccatca tcataaaatg
301 taaagatttt cgaattattc agttggatat tcctggaatg gaggaatgct tgaatatagc
361 cagttccatt gaggcattgt ctactctgga ctccatcact ctgatgtacc ctttctttta
421 ccgtcctatg tttgaagtga tagaagatgg ctggcattcc ttccttcctg agcaagaatt
481 tgaactctat tcttcagcta ccagtgaatg gaggctaagc tatgtcaata aggaatttgc
541 tgtctgtccc tcttacccac caattgtcac agtgcccaaa tccatcgatg atgaagctct
601 tcggaaggta gctacatttc gacatggagg gcgcttccca gtactaagct attaccacaa
661 aagaaatggg atggtaatta tgcgaagtgg tcagccactc actggtacaa acgggaggag
721 gtgcaaggag gacgagaagc tgataaatgc taccctcagg gctggaaagc gtggctacat
781 cattgacacc cgatccctga acgtggctca gcaaactaga gccaaaggag gtggctttga
841 acaagaagct cattatcctc agtggaggcg aattcataag tccattgaga ggtatcacat
901 tcttcaggag agcttaatca aacttgtgga agcttgtaat gaccaaacac ataacatgga
961 ccgatggctc agtaaattgg aggcctctaa ctggctgact cacatcaaag agattctgac
1021 aaccgcctgc ctagcggctc agtgcatcga cagggaagga gcatcaatat tgattcacgg
1081 aacagaagga actgattcca cactccaggt gacctccttg gcccagatca tcttagagcc
1141 aagaagcagg accattcgtg gttttgaggc cctgattgaa agagagtggc tgcaggctgg
1201 tcacccattc cagcagcgct gtgcacagtc agcctactgt aacaccaagc agaagtggga
1261 ggctcctgta tttcttctct tcttggactg cgtgtggcag atccttcgtc agtttccctg
1321 ttcttttgag tttaatgaga atttcctcat catgctcttt gagcatgctt atgcctcaca
1381 gtttggaaca tttctgggca acaatgaaag tgaaagatgt aagttgaagc tacagcagaa
1441 gacgatgtct ttgtggtcct gggttaatca gcccagtgag ctgagtaaat tcaccaatcc
1501 cctctttgaa gccaacaacc ttgtcatctg gccttcagtt gctccgcaga gtcttccact
1561 gtgggaaggt attttcctac gttggaatag atcctctaag tatttggatg aagcatatga
1621 agaaatggtt aacatcattg aatataataa agaattacaa gcaaaagtca atatccttcg
1681 aaggcagttg gcagaactgg aaacagagga cgggatgcag gagagtccct gaaaggtctc
1741 ctcgcaccct tcgcaaggac cttcttgggc ctgtgtccgc cgttctctcc ttgtgccctt
1801 cagttcactt ttacacggta gccttgaagt gaaggcttta gatgtgggac ccccctaatg
1861 taatggattt ctcaatactg tatgaataat gaaacttact atcataaacc atgtttcatg
1921 tggcctgtta gggcctgtca ctttgggagc cggaaggagg tgctagtcat tttattttta
1981 cgtgaaatag atgacctatt taatgccatt tgtgtttcat gccattttat ccaaagcttt
2041 ttctctgtgt ccactctcca aacagcattc tagagcagtc aaggagacag ctaatctctc
2101 tagggactat ttggtggttt aaaaaaaggg tcagactttt aaacactctg accatagaaa
2161 tgtttttcaa aatggcaaca atggataaac caaggatttt gtgtttaaca atccatttcc
2221 agtgtcttcg ccacataaaa tagccatttt ctttaaaata gttttggact aacgaagctg
2281 aaatctattc tcattcttgt ttgtcaagaa aggaaaatct gttattcaag gtaaattatt
2341 tctacaaggg caacaggtat ggtcctccga tatttacatt aagaagagtt aaatttattt
2401 taacgtagac actaaaagta tgtgcaatat ac
//