LOCUS AK223285 1976 bp mRNA linear HUM 17-NOV-2007 DEFINITION Homo sapiens mRNA for pantothenate kinase 3 variant, clone: SYN07621. ACCESSION AK223285 VERSION AK223285.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1976) AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Direct Submission JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases. Contact:Akiko Tanaka RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro, Tsurumi, Yokohama, Kanagawa 230-0045, Japan URL :http://protein.gsc.riken.jp/ REFERENCE 2 AUTHORS Maruyama,K. and Sugano,S. TITLE Oligo-capping : a simple method to replace the cap structure of eucaryotic mRNAs with oligoribonucleotides. JOURNAL Gene 138, 171-174 (1994) REFERENCE 3 AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S. TITLE Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library. JOURNAL Gene 200, 149-156 (1997) COMMENT This work was supported in part by the National Project on Protein Structural and Functional Analysis, Ministry of Education, Culture, Sports, Science and Technology of Japan. Sumio Sugano, Yutaka Suzuki Laboratory of Functional Genomics Department of Medical Genome Sciences Graduate School of Frontier Sciences The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan URL: http://www.k.u-tokyo.ac.jp/index.html.en FEATURES Location/Qualifiers source 1..1976 /clone="SYN07621" /clone_lib="SYN" /db_xref="H-InvDB:HIT000331065" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="this clone is also named as hss001003742" /organism="Homo sapiens" /tissue_type="synovial membrane (knee)" CDS <56..1168 /codon_start=1 /inference="non-experimental evidence, no additional details recorded" /note="Start codon is not identified." /product="pantothenate kinase 3 variant" /protein_id="BAD97005.1" /translation="MKIKDAKKPSFPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVES LKSIRKYLTSNVAYGSTGIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDK NFSTLQTVLCATGGGAYKFEKDFRTIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAEC YYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTF LGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMI YKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLL VYALDYWSKGQLKALFLEHEGYFGAVGALLGLPNFS" BASE COUNT 609 a 345 c 416 g 606 t ORIGIN 1 ctctgctctc agtgccccgg atcggaggcc gtccaccgcc cctcgggccg acgccatgaa 61 gatcaaagat gccaagaaac cctctttccc atggtttggc atggacattg ggggaactct 121 agtaaagctc tcgtactttg aacctattga tatcacagca gaggaagagc aagaagaagt 181 tgagagttta aaaagtattc ggaaatattt gacttctaac gtggcatatg gatccaccgg 241 cattcgggat gtacaccttg aactgaaaga tttaacactt tttggccgaa gagggaactt 301 gcactttatc aggtttccaa cccaggacct gcctactttt atccaaatgg gaagagataa 361 aaacttctca acattgcaga cggtgctatg tgctacagga ggtggtgctt acaagtttga 421 aaaagatttt cgcacaattg gaaacctcca cctgcacaaa ctggatgaac ttgactgcct 481 tgtaaagggc ttgctgtata tagactctgt cagtttcaat ggacaagccg agtgctatta 541 ttttgctaat gcctcagaac ctgagcgatg ccaaaagatg ccttttaacc tggatgatcc 601 ctatccactg cttgtagtga acattggctc aggagtcagt attttagcag tccattccaa 661 agacaactat aaacgagtga ctgggacaag ccttggaggg ggtacctttc tgggtttatg 721 cagtttattg actggctgtg aaagttttga agaggctctt gaaatggcat ccaaaggtga 781 tagcacacaa gctgacaagc tggtccgtga tatttatgga ggagattatg aaagatttgg 841 tttgccaggt tgggctgtag catctagttt tgggaatatg atttataagg agaagcgaga 901 atctgttagt aaagaagatc tggcaagagc tactttagtt actatcacca ataacattgg 961 ttctgtggca cgaatgtgtg ctgttaatga gaaaataaac agagttgtct ttgttggaaa 1021 ctttttacgt gtcaataccc tctcaatgaa acttttggta tatgcactgg attactggtc 1081 aaaaggtcaa ctaaaagcat tgtttctaga acatgagggt tactttggag cagttggtgc 1141 acttcttggg ctgccaaatt tcagctaaag catcaggtct ctctctctgc taataaatgt 1201 catccaagag gaactaaaat cagaggcatt attactgcat tgtttgtcac tgggaaccaa 1261 aggataaaag agtagcataa gctgctgaat gttgccatat taaaggagag aacttggtaa 1321 cgtgaagtat ttctcattga aatgctttcc cttttgtata tagccagtgt taaatcctta 1381 aatgcaatac agcctctgat tattgagctt cctctcaaaa agattttttt attttatgta 1441 gccaacattg cagtactgta tgctcaaaca caaatcttaa agtatcggaa ctgtttagct 1501 tatgaaaata atcgactctg aatatttgtt acaagtctgt tttatgtgtt ttgattacta 1561 gtgagcagaa aataacatac cctgtattca aaattactga aatggcaatc aaagatgatc 1621 atttttatgt gattttagaa atgttaaggc aatactacta attattgtag gtttttttaa 1681 cgtatcaccc aaagcatgta tgtgatcttt ccccattagt atctttttct caaatgccat 1741 aattaactga aatactatta ttaaattttc atgagaattc taaaatgaat cctgggaaat 1801 gcacgtttgg tgatgttgca ctttctgtat tttacaggaa ttagtcaata catgttgaaa 1861 tgtttaacat tttaagattg gaggcttaat tactgggagt ctgtctaatg aagtcctggg 1921 actattgtaa tggaatatga tttgagttca aaaaaaaaaa aaaaaaaaaa aaaaaa //