LOCUS AK223259 3590 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for ATPase, H+/K+ exchanging, alpha polypeptide
variant, clone: STM07904.
ACCESSION AK223259
VERSION AK223259.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3590)
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eucaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 3
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library.
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
Sumio Sugano, Yutaka Suzuki
Laboratory of Functional Genomics Department of Medical Genome
Sciences Graduate School of Frontier Sciences The University of
Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan
URL: http://www.k.u-tokyo.ac.jp/index.html.en
FEATURES Location/Qualifiers
source 1..3590
/clone="STM07904"
/clone_lib="STM"
/db_xref="H-InvDB:HIT000331039"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hss001003653"
/organism="Homo sapiens"
/tissue_type="stomach mucosa"
CDS <30..3137
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="ATPase, H+/K+ exchanging, alpha polypeptide
variant"
/protein_id="BAD96979.1"
/translation="MGKAENYELYSVELGPGPGGDMAAKMSKKKKAGGGGGKRKEKLE
NMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVK
FARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLAIALIAVVVVTGCSGYY
QEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILA
AQGCKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTVQGLVVNTGDRT
IIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVF
FMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTL
TQNRMTVSHLWFDNHIHTADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDA
VPVPKRIVIGDASETALLKFSELTLGNAMGYRDRFPKVCEIPFNSTNKFQLSIHTLED
PRDPRHLLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGF
RQLYLNEKDYPPGYAFDVEAMNFPSSGLCFAGLVSMIDPPRATVPDAVLKCRTAGIRV
IMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK
DMDPSELVEALRTHPEMVFARTSPQQKLVIVEGCQRLGAIVAVTGDGVNDSPALKKAD
IGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPEL
TPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLV
NEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRAQWEDHHLQDLQDSYG
QEWTFGQRLYQQYTCYTVFFISIEVCQIADVLIRKTRRLSAFQQGFFRNKILVIAIVF
QVCIGCFLCYCPGMPNIFNFMPIRFQWWLVLLPYGILIFVYDEIRKLGVRCCPGSWWD
QELYY"
BASE COUNT 747 a 1093 c 1052 g 698 t
ORIGIN
1 gttgggtggg agcacaggca ccgggcacca tggggaaggc cgagaactat gagctctact
61 cggtggagct gggtcctggc cctggcgggg acatggctgc caagatgagc aagaagaaga
121 aggcgggtgg cgggggtggc aagaggaagg agaagctgga gaacatgaag aaggagatgg
181 agattaacga ccaccagctg tcagtggcgg agctggaaca gaaataccag accagtgcca
241 ccaagggcct ctctgcgagc ctggctgctg agctgctgct gcgggatggg cccaacgcac
301 tgcggccacc acggggcacc ccagagtacg tcaagttcgc gaggcagctg gccgggggcc
361 tgcagtgcct catgtgggtt gccgccgcca tctgcctcat cgcctttgcc atccaggcta
421 gtgaggggga cctcaccacc gacgacaatc tgtacctggc aatcgctctc attgctgtgg
481 ttgtcgtcac cggctgctct ggctactacc aggaattcaa gagcaccaac atcatcgcca
541 gctttaagaa ccttgtgcca cagcaagcca ctgtcatccg cgatggagac aaattccaga
601 tcaacgctga ccaactggtg gtgggcgacc tggtggagat gaaaggtggg gacagagtgc
661 ccgccgacat ccgcatcctg gcggcccagg gctgcaaggt ggacaactcc tcgctgacag
721 gggagtctga gccacagacc cgctcacccg agtgcacgca cgagagccct ctggagaccc
781 gcaacatcgc cttcttctcc accatgtgcc ttgagggcac cgtgcagggc ctggtggtga
841 acacgggcga ccgcaccatc attgggcgca tcgcatcgct ggcgtcgggg gtggaaaacg
901 agaagacacc catcgctatc gagatcgagc attttgtgga catcatcgcg ggcctggcca
961 ttctcttcgg tgccacattt tttattgtgg ccatgtgcat tggctacacc ttcctgcggg
1021 ccatggtctt cttcatggcc atcgtggtgg cctatgtgcc tgaggggctg ctggccactg
1081 tcacagtctg cctgtccctg acagccaagc gcctggccag taagaactgc gtggtcaaga
1141 acctggaggc ggtggagaca ttgggctcca cttcggtgat ctgctcggac aagacaggga
1201 ctctcactca gaaccgcatg actgtgtccc atctgtggtt tgacaaccac atccacacag
1261 ctgacaccac ggaagaccag tcagggcaga cgtttgacca gtcctcggag acgtggcggg
1321 cgctgtgccg ggtgctcacc ctgtgcaacc gcgccgcctt caagtccggc caggatgcag
1381 tgcctgtgcc caagcgcatc gtgattggag acgcatcgga gacggcgctg ctcaagttct
1441 cggagctgac gctgggcaac gccatgggct accgggaccg cttcccaaaa gtctgcgaga
1501 tacccttcaa ctccaccaac aagttccagc tgtccatcca tacgctggag gacccgcggg
1561 acccgcgaca cttgctggtg atgaagggcg cccccgagcg cgtgctggag cgctgcagct
1621 ccatccttat caagggccag gagctgccgc tggacgagca gtggcgcgag gccttccaga
1681 ccgcctacct cagcctggga ggcctgggcg aacgcgtgct cggcttccgc cagctctacc
1741 tgaatgagaa ggactacccg cctggctatg ccttcgacgt agaggccatg aactttccat
1801 ctagcggcct ctgctttgcg ggacttgtat ccatgattga cccaccccgg gccaccgtcc
1861 ctgatgctgt gctcaagtgt cgcaccgcag gcatccgggt gatcatggta acgggtgacc
1921 accccatcac cgccaaggcc attgcagcca gtgtgggcat catctcggaa ggcagcgaga
1981 cagtggagga catcgctgcc cgcctccgtg tgcccgtaga ccaggttaat cgcaaggatg
2041 cccgtgcctg tgtgatcaat ggcatgcagc tgaaggacat ggacccatcg gaactggtcg
2101 aggccctgcg cacccacccc gagatggtgt ttgcgcgcac cagcccccag cagaagctgg
2161 tgatcgtgga gggctgccag cggctgggtg cgattgtggc cgtcacgggg gatggtgtga
2221 atgactcccc agctctgaag aaggcagaca tcggagtagc catgggcatc gctggctcag
2281 atgctgccaa aaatgcagct gacatgatcc tgctggatga caactttgcc tccattgtga
2341 caggcgtgga gcagggtcga ctgatcttcg acaacctgaa gaagtctatt gcctacacat
2401 tgaccaagaa catcccagag ctgacaccct acctcatcta catcaccgtc agcgtgcccc
2461 tgcccctcgg gtgcatcacc atcctcttca tcgaactctg cactgacatt ttcccatctg
2521 tgtccctggc atatgaaaag gccgagagtg acatcatgca cctgcgtcca cgcaacccaa
2581 agcgtgacag attggtcaac gagcccctgg ctgcctactc ctacttccag attggtgcca
2641 ttcagtcctt tgctggcttc actgactact tcacggcaat ggcccaggag ggctggttcc
2701 cactgctgtg cgtggggctg cgggcgcagt gggaggacca ccacctacaa gatctgcagg
2761 acagctacgg ccaggagtgg acattcgggc agcgcctgta ccagcagtac acctgctaca
2821 ccgtgttctt catcagcatt gaggtgtgcc agatcgccga tgtcctcatc cgcaagacgc
2881 gccgtctctc tgccttccag caaggcttct tcaggaataa gatcctggtg atcgccatcg
2941 tgttccaggt ctgcatcggc tgcttcctgt gctactgccc cggcatgccc aacatcttca
3001 acttcatgcc cattcggttc cagtggtggc tggtcctcct gccctacggc atcctcatct
3061 tcgtctatga tgagatccgg aagcttggag ttcgctgttg cccagggagc tggtgggacc
3121 aggaactcta ctattagagg gacgactgcc ttcaagcatc cctgcaactg ccacagcagg
3181 tgggggcagg gctcgtggga ccctctggac agccaccaag atatctgagc aaccaagagt
3241 cccagcccca ccagtatctg cttctgtagc ccacggcacc ccaaacttgg agggacctgc
3301 ccactcccct cccccattcc caaggttcgc acctcctgga gcagcagcgc ctgggcagtc
3361 ctctgggctg gcctcgggaa agccgccacc tgtggtggcg gtggggctct gacagggagt
3421 acagctgacc gcttctggag ggtgtttctg ttcttaggac tccagtccag gctggacggc
3481 tgcctgaggg ccctccgtta aagacacgct tgtgtcctgg gcgatggtaa taaaaccagc
3541 tcatgctgac tgtgctgtaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//