LOCUS AK223229 1631 bp mRNA linear HUM 17-NOV-2007 DEFINITION Homo sapiens mRNA for sorting nexin 7 isoform a variant, clone: STM02148. ACCESSION AK223229 VERSION AK223229.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1631) AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Direct Submission JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases. Contact:Akiko Tanaka RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro, Tsurumi, Yokohama, Kanagawa 230-0045, Japan URL :http://protein.gsc.riken.jp/ REFERENCE 2 AUTHORS Maruyama,K. and Sugano,S. TITLE Oligo-capping : a simple method to replace the cap structure of eucaryotic mRNAs with oligoribonucleotides. JOURNAL Gene 138, 171-174 (1994) REFERENCE 3 AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S. TITLE Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library. JOURNAL Gene 200, 149-156 (1997) COMMENT This work was supported in part by the National Project on Protein Structural and Functional Analysis, Ministry of Education, Culture, Sports, Science and Technology of Japan. Sumio Sugano, Yutaka Suzuki Laboratory of Functional Genomics Department of Medical Genome Sciences Graduate School of Frontier Sciences The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan URL: http://www.k.u-tokyo.ac.jp/index.html.en FEATURES Location/Qualifiers source 1..1631 /clone="STM02148" /clone_lib="STM" /db_xref="H-InvDB:HIT000331009" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="this clone is also named as hss001003505" /organism="Homo sapiens" /tissue_type="stomach mucosa" CDS <104..1267 /codon_start=1 /inference="non-experimental evidence, no additional details recorded" /note="Start codon is not identified." /product="sorting nexin 7 isoform a variant" /protein_id="BAD96949.1" /translation="MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVT TIETFITYRIITKTTRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIV KGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPG LLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQRINLIDKISQRIYKEEREYF DEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVL YSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNALKADW ERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP" BASE COUNT 527 a 280 c 353 g 471 t ORIGIN 1 ctttccgggc agcagcggct cttccgccct gctgcaggcg gaggtgctgg atctggacga 61 ggacgaggac gacctggagg tgttcagcaa ggatgcctca ttgatggaca tgaactcctt 121 cagccctatg atgccaacat cccctttatc aatgataaac caaatcaagt ttgaggatga 181 accagattta aaggatctct tcatcacagt tgatgaacct gaaagtcatg ttactacaat 241 agaaactttc attacgtata ggattattac taagacaact cgtggggaat ttgactccag 301 tgaatttgaa gttaggagac gatatcaaga tttcctttgg ttgaagggaa aactggaaga 361 agcacacccc actctgatta ttccaccatt gccagaaaag tttatagtaa aaggaatggt 421 ggaacgcttt aacgatgact tcattgagac acgcaggaag gctttacata aatttttgaa 481 ccgaattgct gatcatccaa ctttaacatt taatgaagac ttcaaaattt ttctcactgc 541 acaagcttgg gaactctctt ctcacaagaa gcaaggtcct ggcttgctaa gcaggatggg 601 gcaaaccgtc agagctgttg cgtcctcaat gagaggagtt aaaaaccgcc cagaggagtt 661 catggaaatg aataacttta ttgaactatt tagccagaga ataaatttga tagataaaat 721 atctcagaga atttataagg aagaaaggga atattttgat gaaatgaaag aatatggccc 781 aattcatatt ctgtggtcag cgtcagaaga ggatctggtt gatactctaa aggatgttgc 841 cagctgcatt gacagatgct gtaaggccac tgaaaagcgg atgtctggac tctcagaggc 901 cctgcttcct gttgtacatg agtacgtgct ttatagtgaa atgttaatgg gtgttatgaa 961 aagaagagac caaatacaag cagaactgga ttccaaagtt gaagttttga cctataaaaa 1021 ggcagatact gatctgcttc cagaggagat tggaaaactt gaagataaag tggaatgtgc 1081 taataatgcc ctgaaagcag attgggagag atggaaacaa aatatgcaaa atgatatcaa 1141 gttagcattt acagatatgg ctgaggagaa tatccattat tatgaacagt gccttgctac 1201 gtgggagtca ttccttacat cacagaccaa ccttcacttg gaagaagcct ctgaagataa 1261 accttaatcc cattgaggac ttctgtttga tctttgggag acagcattta ttaaccaaag 1321 ttattctttc tggatctgcc gtgtccttat aaagtggatg aaaaatgttt tgtacccatc 1381 tggaaaacca acaacttgaa atctcaggta ttccaggtca ctgacatgaa tttgaagata 1441 tatctatctg tatggatata tatctatatg tatatagata tataaataca gagagatatc 1501 tggcttggtt ttaattatgt tcttaaattt gtgtgccaat aattgcatat agattttttt 1561 tcttaaatat ttgactgtgg aacatgccat tttaaatatg ttgtaaggac tgttttaata 1621 aaaagtttag t //