LOCUS AK223170 2503 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for syntaxin binding protein 3 variant, clone:
LNG11390.
ACCESSION AK223170
VERSION AK223170.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2503)
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eucaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 3
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library.
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
Sumio Sugano, Yutaka Suzuki
Laboratory of Functional Genomics Department of Medical Genome
Sciences Graduate School of Frontier Sciences The University of
Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan
URL: http://www.k.u-tokyo.ac.jp/index.html.en
FEATURES Location/Qualifiers
source 1..2503
/clone="LNG11390"
/clone_lib="LNG"
/db_xref="H-InvDB:HIT000330950"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hss001003126"
/organism="Homo sapiens"
/tissue_type="human lung"
CDS <55..1833
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="syntaxin binding protein 3 variant"
/protein_id="BAD96890.1"
/translation="MAPPVAERGLKSVVWQKIKATVFDDCKKEGEWKIMLLDEFTTKL
LASCCKMTDLLEEGITVVENIYKNREPVRQMKALYFITPTSKSVDCFLHDFASKSENK
YKAAYIYFTDFCPDNLFNKIKASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCY
SPDPGNAKGKDAIMETMADQIVTVCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDY
YKIDEKSLIKGKTHSQLLIIDRGIDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDGK
EKEAILEEEDDLWVRIRHRHIAVVLEEIPKLMKEISSTKKATEGKTSLSALTQLMKKM
PHFRKQITKQVVHLNLAEDCMNKFKLNIEKLCKTEQDLALGTDAEGQKVKDSMRVLLP
VLLNKNHDNCDKIRAILLYIFSINGTTEENLDRLIQNVKIENESDMIRNWSYLGVPIV
PQSQQGKPLRKDRSAEETFQLSRWTPFIKDIMEDAIDNRLDSKEWPYCSQCPAVWNGS
GAVSARQKPRANYLEDRKNGSKLIVFVIGGITYSEVRCAYEVSQAHKSCEVIIGSTHV
LTPKKLLDDIKMLNKPKDKVSLIKDE"
BASE COUNT 891 a 381 c 498 g 733 t
ORIGIN
1 aaaaagtagg ttgggagtgg aaggtggtgg ctgctgctcc gcagtgtcgg gaagatggcg
61 ccgccggtgg cagagagggg gctaaagagc gtcgtgtggc agaagataaa agcaacagtg
121 tttgatgact gcaagaaaga aggcgaatgg aagataatgc ttttagatga atttaccact
181 aagcttttgg catcgtgttg caaaatgaca gatcttctag aagaaggtat tactgttgta
241 gagaatattt ataagaaccg tgaacctgtc agacaaatga aagctcttta tttcatcact
301 ccgacatcaa agtctgtaga ttgtttctta catgattttg caagtaaatc ggagaacaag
361 tataaagcag catatattta cttcactgac ttttgccctg ataatctctt taacaaaatt
421 aaggcttctt gctccaagtc aataagaaga tgtaaagaaa taaatatttc cttcattcca
481 catgaatctc aggtgtatac tcttgatgta ccagatgcat tctattactg ttatagtcca
541 gaccctggta atgcaaaggg aaaagatgcc attatggaaa caatggctga ccagatagtt
601 acagtgtgtg ccaccttgga tgaaaatccc ggagtaagat ataaaagtaa acctctagat
661 aatgccagta agcttgcaca gcttgttgaa aaaaagcttg aagactacta caagattgat
721 gaaaagagcc taataaaggg taaaactcat tcacagctct taataattga tcgtggcatt
781 gatcctgtgt ccactgtcct gcatgaactg acctttcagg caatggcata tgatctacta
841 ccaattgaga atgatacata caaatataaa acagatggaa aagaaaagga ggccatcctt
901 gaagaagaag atgacctctg ggttagaatt cgacatcgac atattgcggt tgtgttagag
961 gaaattccca agcttatgaa agaaatttca tcaacaaaga aagcaacaga aggaaagaca
1021 tcacttagtg ctcttaccca gctgatgaaa aagatgcccc atttccgaaa acagattact
1081 aagcaagttg tccatcttaa cttagcagaa gattgcatga ataagttcaa gcttaatata
1141 gaaaagctct gcaaaactga acaggacctg gcacttggaa ctgatgcaga aggacagaag
1201 gtgaaagatt ccatgcgagt actccttcca gttctactca acaaaaatca tgataattgt
1261 gataaaataa gagcaattct actttatatc ttcagtatta atggaactac ggaagaaaat
1321 ttggacaggt tgatccagaa tgtaaagata gaaaatgaga gtgacatgat tcgtaactgg
1381 agttaccttg gtgttcccat tgttccccaa tctcaacaag gcaaaccgtt aagaaaggat
1441 cggtctgcag aagaaacttt tcagctctct cggtggacac cttttatcaa agatattatg
1501 gaggatgcta ttgataatag attagattca aaagaatggc catattgttc ccagtgtcca
1561 gcagtatgga atggttcagg agctgtaagt gctcgccaga aacccagagc taattattta
1621 gaagaccgaa aaaatgggtc aaagctgatt gtttttgtaa ttggagggat cacatactct
1681 gaagtgcgtt gtgcttatga agtttctcag gcacataaat cctgtgaagt tattattggt
1741 tctacacatg ttttaacacc caaaaagctg ttggatgata taaagatgct gaataaaccc
1801 aaggataaag tctccttaat taaagatgaa tagcgtttct ttttggaggg tttagagatt
1861 cttactaata tgttgaacta aaattgaaag aaaatgttgc tgtcatgtaa tttaaacaat
1921 gtaaatattt tatggaataa tggcttttca aatacatttc ttaaggaact gtttatgatt
1981 attactggat ttgtcatttt tgataattta aatattgctg ctgctttgta gatgatgaga
2041 agaaatgtta aagtgctttc taaaaggaaa ttttttcacc tttggaggag aatatattag
2101 agttgtgggt aatttttcac agccacctat gtacatacta attacccatt ggatacttat
2161 atctaaaagt ctcatgctga agtatagttt ttgggaaaga atgattttaa ataaagagat
2221 tgtaaaagta aaaaactgta aatgtatatg tatgatagaa ttgtttcctc taagtgtagt
2281 ttttctttca actaaaattc agtttatgtg taaaataatt cagtcattaa tagaaatgga
2341 gtgatttcac agtgtgtact gttttgccac atacttctaa agaacacaat tttatataat
2401 tttgaaatca tgtatgttta aattagaaaa ccaaaaatca tgaacattct aagagaaaat
2461 aaatatagaa tttaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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