LOCUS AK223087 2103 bp mRNA linear HUM 17-NOV-2007 DEFINITION Homo sapiens mRNA for histocompatibility 28 variant, clone: KAT05119. ACCESSION AK223087 VERSION AK223087.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2103) AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Direct Submission JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases. Contact:Akiko Tanaka RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro, Tsurumi, Yokohama, Kanagawa 230-0045, Japan URL :http://protein.gsc.riken.jp/ REFERENCE 2 AUTHORS Maruyama,K. and Sugano,S. TITLE Oligo-capping : a simple method to replace the cap structure of eucaryotic mRNAs with oligoribonucleotides. JOURNAL Gene 138, 171-174 (1994) REFERENCE 3 AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S. TITLE Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library. JOURNAL Gene 200, 149-156 (1997) COMMENT This work was supported in part by the National Project on Protein Structural and Functional Analysis, Ministry of Education, Culture, Sports, Science and Technology of Japan. Sumio Sugano, Yutaka Suzuki Laboratory of Functional Genomics Department of Medical Genome Sciences Graduate School of Frontier Sciences The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan URL: http://www.k.u-tokyo.ac.jp/index.html.en FEATURES Location/Qualifiers source 1..2103 /cell_line="KATO III" /clone="KAT05119" /clone_lib="KAT" /db_xref="H-InvDB:HIT000330867" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="this clone is also named as hss001002657" /organism="Homo sapiens" CDS <252..1493 /codon_start=1 /inference="non-experimental evidence, no additional details recorded" /note="Start codon is not identified." /product="histocompatibility 28 variant" /protein_id="BAD96807.1" /translation="MVERCSRQGCTITMAYIDYNMIVAFMLGNYINLRESSTEPNDSL WFSLQKKNDTTEIETLLLNTAPKIIDEQLVCRLSKTDIFIICRDNKIYLDKMITRNLK LRFYGHRQYLECEVFRVEGIKDNLDDIKRIIKAREHRNRLLADIRDYRPYADLVSEIR ILLVGPVGSGKSSFFNSIKSIFHGHVTGQAVVGSDITSITERYRIYSVKDGKNGKSLP FMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSCKPITPEHSTFITSPSLKDR IHCVAYVLDINSIDNLYSKMLAKVKQVHKEVLNCGIAYVALLTKVDDCSEVLQDNFLN MSRSMTSQSRVMNVHKMLGIPISNILMVGNYASDLELDPMKDILILSALRQMLRAADD FLEDLPLEETGAIERALQPCI" BASE COUNT 655 a 395 c 414 g 639 t ORIGIN 1 ctttcctaga gtctctgaag ccacagatct cttaagaact ttctgtctcc aaaccgtggc 61 tgctcgataa atcagacaga acagttaatc ctcaatttaa gcctgatcta acccctagaa 121 acagatatag aacaatggaa gtgacaacaa gattgacatg gaatgatgaa aatcatctgc 181 gcaagctgct tggaaatgtt tctttgagtc ttctctataa gtctagtgtt catggaggta 241 gcattgaaga tatggttgaa agatgcagcc gtcagggatg tactataaca atggcttaca 301 ttgattacaa tatgattgta gcctttatgc ttggaaatta tattaattta cgtgaaagtt 361 ctacagagcc aaatgattcc ctatggtttt cacttcaaaa gaaaaatgac accactgaaa 421 tagaaacttt actcttaaat acagcaccaa aaattattga tgagcaactg gtgtgtcgtt 481 tatcgaaaac ggatattttc attatatgtc gagataataa aatttatcta gataaaatga 541 taacaagaaa cttgaaacta aggttttatg gccaccgtca gtatttggaa tgtgaagttt 601 ttcgagttga aggaattaag gataacctag acgacataaa gaggataatt aaagccagag 661 agcacagaaa taggcttcta gcagacatca gagactatag gccctatgca gacttggttt 721 cagaaattcg tattcttttg gtgggtccag ttgggtctgg aaagtccagt tttttcaatt 781 caatcaagtc tatttttcat ggccatgtga ctggccaagc cgtagtgggg tctgatatca 841 ccagcataac cgagcggtat aggatatatt ctgttaaaga tggaaaaaat ggaaaatctc 901 tgccatttat gttgtgtgac actatggggc tagatggggc agaaggagca ggactgtgca 961 tggatgacat tccccacatc ttaaaaggtt gtatgccaga cagatatcag tttaattcct 1021 gtaaaccaat tacacctgag cattctactt ttatcacctc tccatctctg aaggacagga 1081 ttcactgtgt ggcttatgtc ttagacatca actctattga caatctctac tctaaaatgt 1141 tggcaaaagt gaagcaagtt cacaaagaag tattaaactg tggtatagca tatgtggcct 1201 tgcttactaa agtggatgat tgcagtgagg ttcttcaaga caacttttta aacatgagta 1261 gatctatgac ttctcaaagc cgggtcatga atgtccataa aatgctaggc attcctattt 1321 ccaatatttt gatggttgga aattatgctt cagatttgga actggacccc atgaaggata 1381 ttctcatcct ctctgcactg aggcagatgc tgcgggctgc agatgatttt ttagaagatt 1441 tgcctcttga ggaaactggt gcaattgaga gagcgttaca gccctgcatt tgagataagt 1501 tgccttgatt ctgacatttg gcccagcctg tactggtgtg ccgcaatgag agtcaatctc 1561 tattgacagc ctgcttcaga ttttgctttt gttcgttttg ccttctgtcc ttggaacagt 1621 catatctcaa gttcaaaggc caaaacctga gaagcggtgg gctaagatag gtcctactgc 1681 aaaccacccc tccatatttc cgtaccattt acaattcagt ttctgtgaca tctttttaaa 1741 ccactggagg aaaaatgaga tattctctga gatattctct aatttattct tctataacac 1801 tctatataga gctatgtgag tactaatcac attgaataat agttataaaa ttattgtata 1861 gacatctgct tcttaaacag attgtgagtt ctttgagaaa cagcgtggat tttacttatc 1921 tgtgtattca cagagcttag cacagtgcct ggtaatgagc aagcatactt gccattactt 1981 ttccttccca ctctctccaa catcacattc actttaaatt tttctgtata tagaaaggaa 2041 aactagcctg ggcaacatga tgaaacccca tctccactgc aaaaaaaaaa aaaaaaaaaa 2101 aaa //