LOCUS AK223038 1888 bp mRNA linear HUM 17-NOV-2007 DEFINITION Homo sapiens mRNA for cathepsin C isoform a preproprotein variant, clone: JTH03582. ACCESSION AK223038 VERSION AK223038.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1888) AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Direct Submission JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases. Contact:Akiko Tanaka RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro, Tsurumi, Yokohama, Kanagawa 230-0045, Japan URL :http://protein.gsc.riken.jp/ REFERENCE 2 AUTHORS Maruyama,K. and Sugano,S. TITLE Oligo-capping : a simple method to replace the cap structure of eucaryotic mRNAs with oligoribonucleotides. JOURNAL Gene 138, 171-174 (1994) REFERENCE 3 AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S. TITLE Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library. JOURNAL Gene 200, 149-156 (1997) COMMENT This work was supported in part by the National Project on Protein Structural and Functional Analysis, Ministry of Education, Culture, Sports, Science and Technology of Japan. Sumio Sugano, Yutaka Suzuki Laboratory of Functional Genomics Department of Medical Genome Sciences Graduate School of Frontier Sciences The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan URL: http://www.k.u-tokyo.ac.jp/index.html.en FEATURES Location/Qualifiers source 1..1888 /cell_line="JCR" /clone="JTH03582" /clone_lib="JTH" /db_xref="H-InvDB:HIT000330818" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="this clone is also named as hss001002484" /organism="Homo sapiens" /tissue_type="thyroid" CDS <65..1456 /codon_start=1 /inference="non-experimental evidence, no additional details recorded" /note="Start codon is not identified." /product="cathepsin C isoform a preproprotein variant" /protein_id="BAD96758.1" /translation="MGAGPSLLLAALLLLLSGDGAVRCDTPANCTYLDLLGTWVFQVG SSGSQRDVNCSVMGPQEKIVVVYLQKLDTAYDDLGNSGHFTIIYNQGFEIVLNDYKWF AFFKYKEEGSKVTTYCNETMTGWVHDVLGRNWACFTGKKVGTASENVYVNTAHLKNSQ EKYSNRLYKYDHNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPA PLTAEIQQKILHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTN NSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMK EDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTG LRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAI ESIAVAATPIPKL" BASE COUNT 532 a 415 c 420 g 521 t ORIGIN 1 accgctagcc cgcagcgctc ggcttcctgg taattcttca cctcttttct cagctccctg 61 cagcatgggt gctgggccct ccttgctgct cgccgccctc ctgctgcttc tctccggcga 121 cggcgccgtg cgctgcgaca cacctgccaa ctgcacctat cttgacctgc tgggcacctg 181 ggtcttccag gtgggctcca gcggttccca gcgcgatgtc aactgctcgg ttatgggacc 241 acaagaaaaa atagtagtgg tgtaccttca gaagctggat acagcatatg atgaccttgg 301 caattctggc catttcacca tcatttacaa ccaaggcttt gagattgtgt tgaatgacta 361 caagtggttt gcctttttta agtataaaga agagggcagc aaggtgacca cttactgcaa 421 cgagacaatg actgggtggg tgcatgatgt gttgggccgg aactgggctt gtttcaccgg 481 aaagaaggtg ggaactgcct ctgagaatgt gtatgtcaac acagcacacc ttaagaattc 541 tcaggaaaag tattctaata ggctctacaa gtatgatcac aactttgtga aagctatcaa 601 tgccattcag aagtcttgga ctgcaactac atacatggaa tatgagactc ttaccctggg 661 agatatgatt aggagaagtg gtggccacag tcgaaaaatc ccaaggccca aacctgcacc 721 actgactgct gaaatacagc aaaagatttt gcatttgcca acatcttggg actggagaaa 781 tgttcatggt atcaattttg tcagtcctgt tcgaaaccaa gcatcctgtg gcagctgcta 841 ctcatttgct tctatgggta tgctagaagc gagaatccgt atactaacca acaattctca 901 gaccccaatc ctaagccctc aggaggttgt gtcttgtagc cagtatgctc aaggctgtga 961 aggcggcttc ccatacctta ttgcaggaaa gtacgcccaa gattttgggc tggtggaaga 1021 agcttgcttc ccctacacag gcactgattc tccatgcaaa atgaaggaag actgctttcg 1081 ttattactcc tctgagtacc actatgtagg aggtttctat ggaggctgca atgaagccct 1141 gatgaagctt gagttggtcc atcatgggcc catggcagtt gcttttgaag tatatgatga 1201 cttcctccac tacaaaaagg ggatctacca ccacactggt ctaagagacc ctttcaaccc 1261 ctttgagctg actaatcatg ctgttctgct tgtgggctat ggcactgact cagcctctgg 1321 gatggattac tggattgtta aaaacagctg gggcaccggc tggggtgaga atggctactt 1381 ccggatccgc agaggaactg atgagtgtgc aattgagagc atagcagtgg cagccacacc 1441 aattcctaaa ttgtagggta tgccttccag tatttcataa tgatctgcat cagttgtaaa 1501 ggggaattgg tatattcaca gactgtagac tttcagcagc aatctcagaa gcttacaaat 1561 agatttccat gaagatattt gtcttcagaa ttaaaactgc ccttaatttt aatatacctt 1621 tcaatcggcc actggccatt tttttctaag tattcaatta agtgggaatt ttctggaaga 1681 tggtcagcta tgaagtaata gagtttgctt aatcatttgt aattcaaaca tgctatattt 1741 tttaaaatca atgtgaaaac atagacttat ttttaaattg taccaatcac aagaaaataa 1801 tggcaataat tatcaaaact tttaaaatag atgctcatat ttttaaaata aagttttaaa 1861 aataactgca aaaaaaaaaa aaaaaaaa //