LOCUS AK222971 2418 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for epithelial protein lost in neoplasm beta
variant, clone: HSI03626.
ACCESSION AK222971
VERSION AK222971.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2418)
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eucaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 3
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library.
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
Sumio Sugano, Yutaka Suzuki
Laboratory of Functional Genomics Department of Medical Genome
Sciences Graduate School of Frontier Sciences The University of
Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan
URL: http://www.k.u-tokyo.ac.jp/index.html.en
FEATURES Location/Qualifiers
source 1..2418
/clone="HSI03626"
/clone_lib="HSI"
/db_xref="H-InvDB:HIT000330751"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hss001002169"
/organism="Homo sapiens"
/tissue_type="human small intestine"
CDS <98..2377
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="epithelial protein lost in neoplasm beta
variant"
/protein_id="BAD96691.1"
/translation="MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKA
AEETNMEKKRSNTENLSQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRAD
HPPAEVTSHAASGAKADQEEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKK
MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRS
VSGRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQA
AVSKQSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAV
RSTPAEDDSRDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVE
CQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKG
NYDEGFGHRPHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASM
EAKASSQQEKEDKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPE
VPEDVDLDLKKLRRSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEE
SVGGRVAERKQVENAKASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVEN
GADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKEL
SVEEQIKRNRYYDEDEDEE"
BASE COUNT 805 a 531 c 600 g 482 t
ORIGIN
1 aggtgcgcta ggtagagcgc cgggacctgt gacagggctg gtagcagcgc agaggaaagg
61 cggcttttag ccaggtattt cagtgtctgt agacaagatg gaatcatctc catttaatag
121 acggcaatgg acctcactat cattgagggt aacagccaaa gaactttctc ttgtcaacaa
181 gaacaagtca tcggctattg tggaaatatt ctccaagtac cagaaagcag ctgaagaaac
241 aaacatggag aagaagagaa gtaacaccga aaatctctcc cagcacttta gaaaggggac
301 cctgactgtg ttaaagaaga agtgggagaa cccagggctg ggagcagagt ctcacacaga
361 ctctctacgg aacagcagca ctgagattag gcacagagca gaccatcctc ctgctgaagt
421 gacaagccac gctgcttctg gagccaaagc tgaccaagaa gaacaaatcc accccagatc
481 tagactcagg tcacctcctg aagccctcgt tcagggtcga tatccccaca tcaaggacgg
541 tgaggatctt aaagaccact caacagaaag taaaaaaatg gaaaattgtc taggagaatc
601 caggcatgaa gtagaaaaat cagaaatcag tgaaaacaca gatgcttcgg gcaaaataga
661 gaaatataat gttccgctga acaggcttaa gatgatgttt gagaaaggtg aaccaactca
721 aactaagatt ctccgggccc aaagccgaag tgtaagtgga aggaagatct ctgaaaacag
781 ctattctcta gatgacctgg aaataggccc aggtcagttg tcatcttcta catttgactc
841 ggagaaaaat gagagtagac gaaatctgga acttccacgc ctctcagaaa cctctataaa
901 ggatcgaatg gccaagtacc aggcagctgt gtccaaacaa agcagctcaa ccaactatac
961 aaatgagctg aaagccagtg gtggcgaaat caaaattcat aaaatggagc aaaaggagaa
1021 tgtgccccca ggtcctgagg tctgcatcac ccatcaggaa ggggaaaaga tttctgcaaa
1081 tgagaatagc ctggcagtcc gttccacccc tgccgaagat gactcccgtg actcccaggt
1141 taagagtgag gttcaacagc ctgtccatcc caagccacta agtccagatt ccagagcctc
1201 cagtctttct gaaagttctc ctcccaaagc aatgaagaag tttcaggcac ctgcaagaga
1261 gacctgcgtg gaatgtcaga agacagtcta tccaatggag cgtctcttgg ccaaccagca
1321 ggtgtttcac atcagctgct tccgttgctc ctattgcaac aacaaactca gtctaggaac
1381 atatgcatct ttacatggaa gaatctattg taagcctcac ttcaatcaac tctttaaatc
1441 taagggcaac tatgatgaag gctttgggca cagaccacac aaggatctat gggcaagcaa
1501 aaatgaaaac gaagagattt tggagagacc agcccagctt gcaaatgcaa gggagacccc
1561 tcacagccca ggggtagaag atgcccctat tgctaaggtg ggtgtcctgg ctgcaagtat
1621 ggaagccaag gcctcctctc agcaggagaa ggaagacaag ccagctgaaa ccaagaagct
1681 gaggatcgcc tggccacccc ccactgaact tggaagttca ggaagtgcct tggaggaagg
1741 gatcaaaatg tcaaagccca aatggcctcc tgaagacgaa atcagcaagc ccgaagttcc
1801 tgaggatgtc gatctagatc tgaagaagct aagacgatct tcttcactga aggaaagaag
1861 ccgcccattc actgtagcag cttcatttca aagcacctct gtcaagagcc caaaaactgt
1921 gtccccacct atcaggaaag gctggagcat gtcagagcag agtgaagagt ctgtgggtgg
1981 aagagttgca gaaaggaaac aagtggaaaa tgccaaggct tctaagaaga atgggaatgt
2041 gggaaaaaca acctggcaaa acaaagaatc taaaggagag acagggaaga gaagtaagga
2101 aggtcatagt ttggagatgg agaatgagaa tcttgtagaa aatggtgcag actccgatga
2161 agatgataac agcttcctca aacaacaatc tccacaagaa cccaagtctc tgaattggtc
2221 gagttttgta gacaacacct ttgctgaaga attcactact cagaatcaga aatcccagga
2281 tgtggaactc tgggagggag aagtggtcaa agagctctct gtggaagaac agataaagag
2341 aaatcggtat tatgatgagg atgaggatga agagtgacaa attgcaatga tgctgggcct
2401 taaattcatg ttagtgtt
//