LOCUS AK222968 2065 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for sorting nexin 2 variant, clone: HSI01757.
ACCESSION AK222968
VERSION AK222968.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2065)
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eucaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 3
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library.
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
Sumio Sugano, Yutaka Suzuki
Laboratory of Functional Genomics Department of Medical Genome
Sciences Graduate School of Frontier Sciences The University of
Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan
URL: http://www.k.u-tokyo.ac.jp/index.html.en
FEATURES Location/Qualifiers
source 1..2065
/clone="HSI01757"
/clone_lib="HSI"
/db_xref="H-InvDB:HIT000330748"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hss001002163"
/organism="Homo sapiens"
/tissue_type="human small intestine"
CDS <25..1584
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="sorting nexin 2 variant"
/protein_id="BAD96688.1"
/translation="MAAEREPPPLGDGKPTDFEDLEDGEDLFTSTVSTLESSPSSPEP
ASLPAEDISANSNGPKPTEVVLDDDREDLFAEATEEVSLDSPEREPILSSEPSPAVTP
VTPTTLIAPRIESKSMSAPVIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAYM
AYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAAEKSIVGMTK
VKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSELPRAVNTQAL
SGAGILRMVNKAADAVNKMTIKMNESDAWFEEKQQQFENLDQQLRKLHVSVEALVCHR
KELSANTAAFAKSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYMFSEL
LSDYIRLIAAVKGVFDHRMKCWQKWEDAQITLLKKREAEAKMMVANKPDKIQQAKNEI
REWEAKVQQGERDFEQISKTIRKEVGRFEKERVKDFKTVIIKYLESLVQTQQQLIKYW
EAFLPEAKAIA"
BASE COUNT 701 a 385 c 437 g 542 t
ORIGIN
1 gcgcagtcgt tcgggtgagc gaagatggcg gccgagaggg aacctcctcc gctgggggac
61 gggaagccca ccgactttga ggatctggag gacggagagg acctgttcac cagcactgtc
121 tccaccctag agtcaagtcc atcatctcca gaaccagcta gtcttcctgc agaagatatt
181 agtgcaaact ccaatggccc aaaacccaca gaagttgtat tagatgatga cagagaagat
241 ctttttgcag aagccacaga agaagtttct ttggacagcc ctgaaaggga acctatccta
301 tcctcggaac cttctcctgc agtcacacct gtcactccta ctacactcat tgctcctaga
361 attgaatcaa agagtatgtc tgctcccgtg atctttgata gatccaggga agagattgaa
421 gaagaagcaa atggagacat ttttgacata gaaattggtg tatcagatcc agaaaaagtt
481 ggtgatggca tgaatgccta tatggcatat agagtaacaa caaagacatc tctttccatg
541 ttcagtaaga gtgaattttc agtgaaaaga agattcagcg actttcttgg tttgcacagc
601 aaattagcaa gcaaatattt acatgttggt tatattgtgc caccagctgc agaaaagagt
661 atagtaggga tgaccaaggt caaagtgggt aaagaagact catcatccac tgagtttgta
721 gaaaaacgga gagcagctct tgaaaggtat cttcaaagaa cagtaaaaca tccaacttta
781 ctacaggatc ctgatttaag gcagttcttg gaaagttcag agctgcctag agcagttaat
841 acacaggctc tgagtggagc aggaatattg aggatggtga acaaggctgc cgacgctgtc
901 aacaaaatga caatcaagat gaatgaatcg gatgcatggt ttgaagaaaa gcagcagcaa
961 tttgagaatc tggatcagca acttaggaaa cttcatgtca gtgttgaagc cttggtctgt
1021 catagaaaag aactttcagc caacacagct gcctttgcta aaagtgctgc catgttaggt
1081 aattctgagg atcatactgc tttatctaga gctttgtctc agcttgcaga ggttgaggag
1141 aagatagacc agttacatca agaacaagct tttgctgact tttatatgtt ttcagaacta
1201 cttagtgact acattcgtct tattgctgca gtgaaaggtg tgtttgacca tcgaatgaag
1261 tgctggcaga aatgggaaga tgctcaaatt actttgctca aaaaacgtga agctgaagca
1321 aaaatgatgg ttgctaacaa accagataaa atacagcaag ctaaaaatga aataagagag
1381 tgggaggcga aagtgcaaca aggggaaaga gattttgaac agatatctaa aacgattcga
1441 aaagaagtgg gaagatttga gaaagaacga gtgaaggatt ttaaaaccgt tatcatcaag
1501 tacttagaat cactagttca aacacaacaa cagctgataa aatactggga agcattccta
1561 cctgaagcca aagccattgc ctagcaataa gattgttgcc gttaagaaga ccttggatgt
1621 tgttccagtt atgctggatt ccacagtgaa atcatttaaa accatctaaa taaaccacta
1681 tatattttat gaattacatg tggttttata tacacacaca cacacacaca cacacacaca
1741 cactctgaca ttttattaca agctgcatgt cctgaccctc tttgaattaa gtggactgtg
1801 gcatgacatt ctgcaatact ttgctgaatt gaacactatt gtgtcttaaa tacttgcact
1861 aaatagtgca ctgcaagacc agaaaatttt acaatatttt ttctttacaa tatgttctgt
1921 agtatgttta ccctctttat gaagtgaatt accaatgctt tgaataatgt tcacttatac
1981 attcctgtac agaaattacg attttgtgat tacagtaata aaatgatatt ccttgtgaaa
2041 aaaaaaaaaa aaaaaaaaaa aaaaa
//