LOCUS AK222923 1834 bp mRNA linear HUM 17-NOV-2007 DEFINITION Homo sapiens mRNA for tumor differentially expressed protein 1 variant, clone: HRC08488. ACCESSION AK222923 VERSION AK222923.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1834) AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Direct Submission JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases. Contact:Akiko Tanaka RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro, Tsurumi, Yokohama, Kanagawa 230-0045, Japan URL :http://protein.gsc.riken.jp/ REFERENCE 2 AUTHORS Maruyama,K. and Sugano,S. TITLE Oligo-capping : a simple method to replace the cap structure of eucaryotic mRNAs with oligoribonucleotides. JOURNAL Gene 138, 171-174 (1994) REFERENCE 3 AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S. TITLE Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library. JOURNAL Gene 200, 149-156 (1997) COMMENT This work was supported in part by the National Project on Protein Structural and Functional Analysis, Ministry of Education, Culture, Sports, Science and Technology of Japan. Sumio Sugano, Yutaka Suzuki Laboratory of Functional Genomics Department of Medical Genome Sciences Graduate School of Frontier Sciences The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan URL: http://www.k.u-tokyo.ac.jp/index.html.en FEATURES Location/Qualifiers source 1..1834 /cell_type="primary human renal epithelial cells" /clone="HRC08488" /clone_lib="HRC" /db_xref="H-InvDB:HIT000330703" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="this clone is also named as hss001001942" /organism="Homo sapiens" /tissue_type="kidney" CDS <88..1509 /codon_start=1 /inference="non-experimental evidence, no additional details recorded" /note="Start codon is not identified." /product="tumor differentially expressed protein 1 variant" /protein_id="BAD96643.1" /translation="MGAVLGVFSLASWVPCLCSGASCLLCSCCPNSKNSTVTRLIYAF ILLLSTVVSYIMQRKEMETYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRIS FAMAIFFFVFSLLMFKVKTSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVW FVVGMIGAALFILIQLVLLVDFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSI ICVGLLYTYYTKPDGCTENKFFISINLILCVVASIISIHPKIQEHQPRSGLLQSSLIT LYTMYLTWSAMSNEPDRSCNPNLMSFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLD SDNFIGLFVFVLCLLYSSIRTSTNSQVDKLTLSGSDSVILGDTTTSGASDEEDGQPRR AVDNEKEGVQYSYSLFHLMLCLASLYIMMTLTSRYSPDAKFQSMTSKWPAVWVKISSS WVCLLLYVWTLVAPLVLTSRDFS" BASE COUNT 441 a 439 c 404 g 550 t ORIGIN 1 atgtttctgg ggagtcacct cagctggcag ttaccaccgt gttagaaagc agcctcagga 61 ccggccacct ccatcactgg cgtcaccatg ggggctgtgc tgggtgtctt ctccctcgcc 121 agctgggttc catgcctctg cagcggtgcc tcatgtttgc tgtgtagttg ctgtcctaac 181 agtaagaatt ccacggtgac tcgcctcatt tatgctttca ttctcctcct gagcactgtc 241 gtatcctata tcatgcagag aaaagagatg gaaacttact tgaagaagat tcctggattt 301 tgtgaagggg gatttaaaat ccatgaggct gatataaatg cagataaaga ttgtgatgtg 361 ctggttggtt ataaagctgt gtatcggatc agctttgcca tggccatctt tttctttgtc 421 ttttctctgc tcatgttcaa agtaaaaaca agtaaagatc tccgagcggc agtacacaat 481 gggttttggt tcttcaaaat tgctgccctt attggaatca tggttggctc tttctacatc 541 cctgggggct atttcagctc agtctggttt gttgttggca tgataggggc cgccctcttc 601 atcctcattc agctggtgct gctggtagat tttgctcatt cttggaatga atcatgggta 661 aatcgaatgg aagaaggaaa cccaaggttg tggtatgctg ctttactgtc tttcacaagc 721 gccttttata tcctgtcaat catctgtgtc gggctgctct atacatatta caccaaacca 781 gatggctgca cagaaaacaa gttcttcatc agtattaacc tgatcctttg cgttgtggct 841 tctattatat cgatccaccc aaaaattcag gaacaccagc ctcgctccgg cctcttgcag 901 tcctccctca tcaccctcta cactatgtac ctcacctggt cagccatgtc caatgaacct 961 gatcgttcct gcaatcccaa cctgatgagc tttattacac gcataactgc accaaccctg 1021 gctcctggaa attcaactgc tgtggtccct acccctactc caccatcaaa gagtgggtct 1081 ttactggatt cagataattt tattggactg tttgtctttg ttctctgcct cttgtattct 1141 agcatccgca cttccactaa tagccaagta gacaagctga ccctgtcagg gagtgacagc 1201 gtcatccttg gtgatacaac taccagtggt gccagtgatg aagaagatgg acagcctcgg 1261 cgggctgtgg acaacgagaa agagggagtg cagtatagct actccttatt ccacctcatg 1321 ctctgcttgg cttccttgta catcatgatg accctgacca gccggtacag ccctgatgca 1381 aagtttcaga gcatgaccag caagtggcca gctgtgtggg tcaagatcag ctccagctgg 1441 gtctgcctcc tgctttacgt ctggaccctt gtggctccac ttgtcctcac cagtcgggac 1501 ttcagctgaa cctctgagtg ccaaggacac cactggaact cacaaaggtc tccttcaccg 1561 aaaacccata taccttttaa gtttgtttca actaaaatat taagtgaatg ctttgcaagt 1621 ttgactgtat gcaggtttat atcagaaggt gagattgaat aatgcttgat gcagaatcga 1681 aacttctcat ttatctgtat attatgttta cttctaagga tatagcacaa agggaacatt 1741 ttttgtttaa agtgaactac agctgtgctg tgaagagagt tctttataaa gcctgtaggt 1801 tcttttaact ttggtttaaa atgtaagata ggaa //