LOCUS AK222832 2654 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for CCAAT displacement protein isoform b
variant, clone: HEP07381.
ACCESSION AK222832
VERSION AK222832.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2654)
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eucaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 3
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library.
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
Sumio Sugano, Yutaka Suzuki
Laboratory of Functional Genomics Department of Medical Genome
Sciences Graduate School of Frontier Sciences The University of
Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan
URL: http://www.k.u-tokyo.ac.jp/index.html.en
FEATURES Location/Qualifiers
source 1..2654
/cell_line="HepG2"
/clone="HEP07381"
/clone_lib="HEP"
/db_xref="H-InvDB:HIT000330612"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hss001001554"
/organism="Homo sapiens"
/tissue_type="liver"
CDS <24..2060
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="CCAAT displacement protein isoform b variant"
/protein_id="BAD96552.1"
/translation="MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKR
LIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDP
VPALDLGQQLQLKVQRLHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREY
EQTLKNQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKT
RTELFDLKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQ
LASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQ
ISQLEQQLSAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSEGAGTQDAAKPL
EVLLLEKNRSLQSENAALRISNSDLSGRCAELQVRITEAVATATEQRELIARLEQDLS
IIQSIQRPDAEGATEHRLEKIPEPIKEATALFYGPAAPASGALPEGQVDSLLSIISSQ
RERFRARNQELEAENRLAQHTLQALQSELDSLRADNIKLFEKVKFLQSYPGRGSGSDD
TELRYSSQYEERLDPFSSFSKRERQRKYLSLSPWDKATLSMGRLVLSNKMARTIGFFY
TLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADHLHKFHENDNGAAAGDLWQ"
BASE COUNT 691 a 776 c 734 g 453 t
ORIGIN
1 actccgtctc aatatgtctc aagatggcgg ccaatgtggg atcgatgttt caatattgga
61 agcgctttga tttacagcag ctgcagagag aactcgatgc caccgcaacg gtattggcga
121 accggcagga tgaaagtgag cagtccagaa agcggcttat cgaacagagc cgggagttca
181 agaagaacac tccagaggat ttgcgcaagc aggtagcgcc gctgctgaag agtttccaag
241 gagagattga tgcactgagt aaaagaagca aggaagctga agcagctttc ttgaatgtct
301 acaaaagatt gattgacgtc ccagatcccg taccagcttt ggatctcgga cagcaactcc
361 agctcaaagt gcagcgcctg cacgatattg aaacagagaa ccagaaactt agggaaactc
421 tggaagaata caacaaggaa tttgctgaag tgaaaaatca agaggttacg ataaaagcac
481 ttaaagagaa aatccgagaa tatgaacaga cactgaagaa ccaagccgaa accatagctc
541 ttgagaagga acagaagtta cagaatgact ttgcagaaaa ggagagaaag ctgcaggaga
601 cacagatgtc caccacctca aagctggagg aagctgagca taaggttcag agcctacaaa
661 cagccctgga aaaaactcga acagaattat ttgacctgaa aaccaaatac gatgaagaaa
721 ctactgcaaa ggccgacgag attgaaatga tcatgacgga ccttgaaagg gcaaaccaga
781 gggcagaggt ggctcagaga gaggcggaga ccttaaggga acagctctca tcggccaatc
841 actccctcca gctggcctca cagatccaga aggcaccaga cgtggagcag gccatagagg
901 tgctgacccg ctccagccta gaagttgagt tggccgccaa ggagcgggag atcgcacagc
961 tggtggagga cgtgcagaga ctccaggcca gcctcaccaa gctgcgggag aattcggcca
1021 gccagatctc acagcttgag cagcagctga gcgccaaaaa cagcacactc aaacaactgg
1081 aagaaaaact caaaggccag gctgactatg aagaggtgaa gaaagagctg aacattctga
1141 agtccatgga gtttgcaccg tccgagggcg ctgggacaca ggatgcggcc aagcccctgg
1201 aggtgctgtt gctggagaag aaccgctcgc tgcagtccga gaacgccgcg ctgcgcatct
1261 ccaacagcga cctgagcgga cgctgtgcgg agctgcaagt ccgtatcact gaggctgtgg
1321 ccacagccac tgagcagaga gagctgatcg cccgcctgga gcaggacctg agcatcattc
1381 agtccatcca gcggcccgat gccgagggtg ccactgagca ccgcctggag aagatcccag
1441 agcccatcaa agaggccact gccctattct acggacctgc agcaccagcc agcggtgccc
1501 tcccagaggg ccaggtggat tcactgcttt ccatcatctc cagccagagg gagcgcttcc
1561 gtgcccggaa ccaggagctt gaggccgaga accgcctggc ccagcacacc ctccaggccc
1621 tgcagagtga gctggacagc ctgcgcgccg acaacatcaa gctctttgag aaggtcaagt
1681 tcctgcagag ctaccctggc cggggcagcg gcagtgatga cacggagctg cggtactcgt
1741 cccagtacga ggagcgcctg gaccccttct cctccttcag caagcgggag cggcagagga
1801 agtacctgag cttgagtccc tgggacaagg ccaccctcag catggggcgt ctggttctct
1861 ccaacaagat ggcgcgcacc atcggcttct tctacacact gttcctgcac tgcctggtct
1921 tcctggtgct ctacaagctg gcatggagcg agagcatgga gagggactgt gccaccttct
1981 gcgccaagaa gttcgctgac cacctgcaca agttccacga gaatgacaac ggggctgcgg
2041 ctggtgactt gtggcagtga taccccgggg cctcccccgt gacagtgacg gctgcgcctc
2101 caccccgact gctcagtgca tctaatcact tagactcccc tgaagaatcc cccatggaaa
2161 ctgcccttat ccgctgtcca gcagctgcca gaggccccag gtcacctcgg gtccccttga
2221 aagaatgtct cggtcacatc aggcccgcta ggtccagaga gcgagccccc aatgcccggc
2281 caggctaagc cgcagagacc ctctcagccc ccacctcagg ttagggctct gcccgcagcc
2341 tgacctctag ccctggtggc agaggtccct cagctgcgag gctaattggg tgaccaccga
2401 ttccagctgc ggttaatcca gcttgggcct gtctgcactg cgatcctctt gggctctcct
2461 aggatccccc catgccccgt aagaggtgga agacgcttcc ttccaggaca gcaggctttg
2521 agtccagcac ccccagcctg cctttgccac cagccccacc ctgcagagta tatgaggctt
2581 gacagagtct gccccctccc ccactgcacc ccaagagaga gagccccagc cagcggaaca
2641 gtttctatta cccc
//