LOCUS AK222797 2137 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for arginyl-tRNA synthetase variant, clone:
HEP01391.
ACCESSION AK222797
VERSION AK222797.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2137)
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eucaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 3
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library.
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
Sumio Sugano, Yutaka Suzuki
Laboratory of Functional Genomics Department of Medical Genome
Sciences Graduate School of Frontier Sciences The University of
Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan
URL: http://www.k.u-tokyo.ac.jp/index.html.en
FEATURES Location/Qualifiers
source 1..2137
/cell_line="HepG2"
/clone="HEP01391"
/clone_lib="HEP"
/db_xref="H-InvDB:HIT000330577"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hss001001411"
/organism="Homo sapiens"
/tissue_type="liver"
CDS <18..2000
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="arginyl-tRNA synthetase variant"
/protein_id="BAD96517.1"
/translation="MDVLVSECSARLLQQEEEIKSLTAEIDRLKNCGCLGASPNLEQL
QEENLKLKYRLNILRKSLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLV
TPSQQAKFGDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPG
FINVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIG
ESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKES
KKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERG
ESFYQDGMNDIVKEFEDRGFVQVDDGRKIVFVPGCSIPLTIVKSDGGYTYDTSDLAAI
KQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKK
KFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLAAEELNAAQTSVAYGCIKYADL
SHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTRIRSIARLANIDEEMLQKAARETKILL
DHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQT
GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM"
BASE COUNT 684 a 374 c 496 g 583 t
ORIGIN
1 gagacgctga tgggaggatg gacgtactgg tgtctgagtg ctccgcgcgg ctgctgcagc
61 aggaagaaga gattaaatct ctgactgctg aaattgaccg gttgaaaaac tgtggctgtt
121 taggagcttc tccaaatttg gagcagttac aagaagaaaa tttaaaatta aagtatcgac
181 tgaatattct tcgaaagagt cttcaggcag aaaggaacaa accaactaaa aatatgatta
241 acattattag ccgcctacaa gaggtctttg gtcatgcaat taaggctgca tatccagatt
301 tggaaaatcc tcctctgcta gtgacaccaa gtcagcaggc caagtttggg gactatcagt
361 gtaatagtgc tatgggtatt tctcagatgc tcaaaaccaa ggaacagaaa gttaatccaa
421 gagaaattgc tgaaaacatt accaaacacc tcccagacaa tgaatgtatt gaaaaagttg
481 aaattgctgg tcctggtttt attaatgtcc acttaagaaa ggattttgta tcagaacaat
541 tgaccagtct tctagtgaat ggagttcaac tacctgctct gggagagaat aaaaaggtta
601 tagttgactt ttcctcccct aatatagcta aagagatgca tgtaggccac ctgaggtcaa
661 ctatcatagg agagagtata agccgcctct ttgaatttgc agggtatgac gtgctcaggt
721 taaatcatgt aggagactgg gggacccagt ttggcatgct catcgctcac ctgcaagaca
781 aatttccaga ttatctaaca gtttcacctc ctattgggga tcttcaggtc ttttataagg
841 aatctaagaa gaggtttgat actgaggagg aatttaagaa gcgagcatat cagtgtgtag
901 ttctgctcca gggtaaaaac ccagatatta caaaagcttg gaagcttatc tgtgatgtct
961 cccgccaaga gttaaataaa atctatgatg cattggacgt ctctttaata gagagagggg
1021 aatccttcta tcaagatggg atgaatgata ttgtaaagga atttgaagat agaggatttg
1081 tgcaggtgga tgatggcaga aagattgtat ttgtcccagg gtgttccata ccattaacca
1141 tagtaaaatc agatggaggt tatacctatg atacatctga cctggctgct attaaacaaa
1201 gactatttga ggaaaaagca gatatgatta tctatgttgt ggacaatgga caatctgtgc
1261 acttccagac aatatttgct gctgctcaaa tgattggttg gtatgaccct aaagtaactc
1321 gagtcttcca tgctggattt ggtgtggtgc taggggaaga caagaaaaag tttaaaacac
1381 gttcgggtga aacagtgcgc ctcatggatc ttctgggaga aggactaaaa cgatccatgg
1441 acaagttgaa ggaaaaagaa agagacaagg tcttagctgc agaggaattg aatgctgctc
1501 agacatccgt tgcgtatggc tgcatcaaat atgctgacct ttcccataac cggttgaatg
1561 actacatctt ctcctttgac aaaatgctag atgacagagg aaatacagct gcttacttgt
1621 tgtatgcctt cactagaatc aggtctattg cacgtctggc caatattgat gaagaaatgc
1681 tccaaaaagc tgctcgagaa accaagattc ttttggatca tgagaaggaa tggaaactag
1741 gccggtgcat tttacggttc cctgagattc tgcaaaagat tttagatgac ttatttctcc
1801 acactctctg tgattatata tatgagctgg caactgcttt cacagagttc tatgatagct
1861 gctactgtgt ggagaaagat agacagactg gaaaaatatt gaaggtgaac atgtggcgta
1921 tgctgctatg tgaagcagta gctgctgtca tggccaaggg gtttgatatc ctgggaataa
1981 aacctgtcca aaggatgtaa tccttcatag gtttgaacac tgtgtgtttt taccaaagtg
2041 gccattggca ctgtttgctt ttttacaatc atgtggacac aagcataagt aaagaaaatt
2101 tgtcaaccag gcaaaaaaaa aaaaaaaaaa aaaaaaa
//