LOCUS AK222715 1925 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for ankyrin repeat and SOCS box-containing
protein 3 isoform a variant, clone: COL01933.
ACCESSION AK222715
VERSION AK222715.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1925)
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eucaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 3
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library.
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
Sumio Sugano, Yutaka Suzuki
Laboratory of Functional Genomics Department of Medical Genome
Sciences Graduate School of Frontier Sciences The University of
Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan
URL: http://www.k.u-tokyo.ac.jp/index.html.en
FEATURES Location/Qualifiers
source 1..1925
/clone="COL01933"
/clone_lib="COL"
/db_xref="H-InvDB:HIT000330495"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hss001001013"
/organism="Homo sapiens"
/tissue_type="colon"
CDS <1..1541
/codon_start=3
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="ankyrin repeat and SOCS box-containing protein
3 isoform a variant"
/protein_id="BAD96435.1"
/translation="YADTCSTVGLAAREANVKVLRQLLKKGRSVDVADNRGWMPIHEA
AYHNSVECLQMLINADSSENYIKMKTFEGFCALHLAASQGHWKIVQILLEAGADPNAT
TLEETTPLFLAVENGQIDVLRLLLQHGANVNGSHSMCGWNSLHQASFQENAEIIKLLL
RKGANKECQDDFGITPLFVAAQYGKLESLSILISSGANVNCQALDKATPLFIAAQEGH
TKCVELLLSSGADPDLYCNEDSWQLPIHAAAQMGHTKILDLLIPLTNRACDTGLNKVS
PVYSAVFGGHEDCLEILLRNGYSPDAQACLVFGFSSPVCMAFQKDCEFFGIVNILLKY
GAQINELHLAYCLKYEKFSIFRYFLRKGCSLGPWNHIYEFVNHAIKAQAKYKEWLPHL
LVAGFDPLILLCNSWIDSVSIDTLIFTLEFTNWKTLAPAVERMLSARASNAWILQQHI
ATVPSLTHLCRLEIRSSLKSERLRSDSYISQLPLPRSLHNYLLYEDVLRMYEVPELAA
IRDG"
BASE COUNT 597 a 361 c 396 g 571 t
ORIGIN
1 cttacgcgga cacgtgctct acagttggac ttgctgccag ggaagccaat gttaaagtct
61 taaggcaact gctcaaaaag ggccgaagtg tcgatgttgc agataacagg ggatggatgc
121 caattcatga agcagcttat cacaactctg tagaatgttt gcaaatgtta attaatgcag
181 attcatctga aaactacatt aagatgaaga cctttgaagg tttctgtgct ttgcatctcg
241 ctgcaagtca aggacattgg aaaatcgtac agattctttt agaagctggg gcagatccta
301 atgcaactac tttagaagaa acgacaccat tgtttttagc tgttgaaaat ggacagatag
361 atgtgttaag gctgttgctt caacacggag caaatgttaa tggatcccat tctatgtgtg
421 gatggaactc cttgcaccag gcttcttttc aggaaaatgc tgagatcata aaattgcttc
481 ttagaaaagg agcaaacaag gaatgccagg atgactttgg aatcacacct ttatttgtgg
541 ctgctcagta tggcaagcta gaaagcttga gcatacttat ttcatcgggt gcaaatgtca
601 attgtcaagc cttggacaaa gctacaccct tgttcattgc tgctcaagag ggacacacaa
661 aatgtgtgga gcttttgctc tccagtgggg cagatcctga tctttactgt aatgaggaca
721 gttggcagtt acctattcat gcagctgcac aaatgggcca tacaaaaatc ttggacttgt
781 taataccact tactaaccgg gcctgtgaca ctgggctaaa caaagtaagc cctgtttact
841 cagcagtgtt tgggggacat gaagattgcc tagaaatatt actccggaat ggctacagcc
901 cagacgccca ggcgtgcctt gtttttggat tcagttctcc tgtgtgcatg gctttccaaa
961 aggactgtga gttctttgga attgtgaaca ttcttttgaa atatggagcc cagataaatg
1021 aacttcattt ggcatactgc ctgaagtacg agaagttttc gatatttcgc tactttttga
1081 ggaaaggttg ctcattggga ccatggaacc atatatatga atttgtaaat catgcaatta
1141 aagcacaagc aaaatataag gagtggttgc cacatcttct ggttgctgga tttgacccac
1201 tgattctact gtgcaattct tggattgact cagtcagcat tgacaccctt atcttcactt
1261 tggagtttac taattggaag acacttgcac cagctgttga aaggatgctc tctgctcgtg
1321 cctcaaacgc ttggattcta cagcaacata ttgccactgt tccatccctg acccatcttt
1381 gtcgtttgga aattcggtcc agtctaaaat cagaacgtct acggtctgac agttatatta
1441 gtcagctgcc acttcccaga agcctacata attatttgct ctatgaagac gttctgagga
1501 tgtatgaagt tccagaactg gcagctattc gagatggata aatcagtgaa actacttaac
1561 acagctaatt tttttctctg aaaaatcatc gagacaaaag agccacagag tacaagtttt
1621 tatgatttta tagtcaaaag atgattattg attgtcagat aggttaggtt ttggggggcc
1681 agtagttcag tgagaatgtt tatgtttaca actagccttc ccagtaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aattgtaaac atcacttata ttactttatt gcagcttcat caccagtaca
1801 ttatatgttg taatatttat ttacctgatc attttgatca ttttctgctt tattttgcta
1861 ataaactgtg atgttacttc taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaa
//