LOCUS AK222681 2715 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for ubiquitin specific protease 16 isoform a
variant, clone: CBR02581.
ACCESSION AK222681
VERSION AK222681.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2715)
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eucaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 3
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library.
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
Sumio Sugano, Yutaka Suzuki
Laboratory of Functional Genomics Department of Medical Genome
Sciences Graduate School of Frontier Sciences The University of
Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan
URL: http://www.k.u-tokyo.ac.jp/index.html.en
FEATURES Location/Qualifiers
source 1..2715
/clone="CBR02581"
/clone_lib="CBR"
/db_xref="H-InvDB:HIT000330461"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hss001000828"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <132..2603
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="ubiquitin specific protease 16 isoform a
variant"
/protein_id="BAD96401.1"
/translation="MGKKRTKGKTVPIDDSSETLEPVCRHIRKGLEQGNLKKALVNVE
WNICQDCKTDNKVKDKAEEETEEKPSVWLCLKCGHQGCGRNSQEQHALKHYLTPRSEP
HCLVLSLDNWSVWCYVCDNEVQYCSSNQLGQVVDYVRKQASITTPKPAEKDNGNIELE
NKKLEKESKNEQEREKKENMAKENPPMNSPCQITVKGLSNLGNTCFFNAVMQNLSQTP
VLRELLKEVKMSGTIVKIEPPDLALTEPLEINLEPPGPLTLAMSQFLNEMQETKKGVV
TPKELFSQVCKKAVRFKGYQQQDSQELLRYLLDGMRAEEHQRVSKGILKAFGNSTEKL
DEELKNKVKDYEKKKPMPSFVDRIFGGELTSMIMCDQCRTVSLVHESFLDLSLPVLDD
QSGKKSVNDKNLKKTVEDEDQDSEEEKDNDSYIKERSDIPSGTSKHLQKKAKKQAKKQ
AKNQRRQQKIQGKVLHLNDICTIDHPEDSEYEAEMSLQGEVNIKSNHISQEGVMHKEY
CVNQKDLNGQAKMIESVTDNQKSTEEVDMKNINMDNDLEVLTSSPTRNLNGAYLTEGS
NGEVDISNGFKNLNLNAALHPDEINIEILNDSHTPGTKVYEVVNEDPETAFCTLANRE
VFNTDECSIQHCLYQFTRNEKLRDANKLLCEVCTRRQCNGPKANIKGERKHVYTNAKK
QMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEENTRV
LYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHISD
THVQAVPTTKVLNSQAYLLFYERIL"
BASE COUNT 988 a 464 c 574 g 689 t
ORIGIN
1 gctctcaatt cgtcaccagg aggaagacgg agctggctgc ccagcccaaa ggcccatgag
61 gggatgcagt tatgggctct gtcgccgtgg attgttattt tgtgtcagta agtaatccat
121 aaagtgccaa catgggaaag aaacggacaa agggaaaaac tgttccaatc gatgattcct
181 ctgaaacttt agaacctgtg tgcaggcaca ttagaaaagg attggaacaa ggtaatttga
241 aaaaggcttt agtgaatgtg gaatggaata tctgccaaga ctgtaagact gacaataaag
301 tgaaagataa agctgaagaa gaaacagaag aaaagccttc agtttggctg tgtcttaaat
361 gtggccatca gggctgtggc agaaattctc aggagcagca tgccttgaag cactatctga
421 cgccaagatc tgaacctcac tgtctggttc ttagtttgga caactggagt gtatggtgtt
481 acgtatgtga taatgaggtc cagtattgta gttcaaacca gttgggtcaa gtggttgatt
541 atgtcagaaa acaagccagc attacaactc caaagccagc agagaaagat aatggaaata
601 ttgaacttga aaataaaaaa ttagaaaaag agagtaagaa tgaacaagag agagaaaaga
661 aggaaaacat ggctaaagag aatcctccca tgaattctcc ttgccaaata accgtgaaag
721 gactcagtaa tttgggaaac acatgtttct tcaatgcagt tatgcagaac ttgtcacaaa
781 caccagtgct tagagaacta ctaaaagaag tgaaaatgtc tggaacaatt gtaaaaattg
841 aaccacctga tttggcatta acagaaccat tagaaataaa ccttgagcct ccaggccctc
901 ttactttagc catgagccag tttcttaatg agatgcaaga gaccaaaaag ggggttgtga
961 caccgaaaga actcttttct caggtctgta aaaaagcagt gcggtttaaa ggctatcagc
1021 agcaagacag ccaggagctg cttcgctact tattggatgg gatgagagca gaagaacacc
1081 aaagagtgag taaaggaata cttaaagcat ttggtaattc tactgaaaag ttggatgaag
1141 aactaaaaaa taaagttaaa gattatgaga agaaaaaacc aatgccaagt tttgttgacc
1201 gcatctttgg tggtgaacta actagtatga tcatgtgtga tcaatgcaga actgtctcct
1261 tggttcatga atctttcctt gatttgtccc tcccagtttt agatgatcag agtggtaaga
1321 aaagtgtaaa tgataaaaat ctgaaaaaga cagtggagga tgaagatcaa gatagtgagg
1381 aagaaaaaga taacgacagt tacataaaag agagaagtga tattccttct ggaacaagta
1441 agcacttaca gaaaaaagca aagaaacaag ccaaaaagca agccaagaac caacgaagac
1501 aacaaaaaat tcaaggaaaa gttcttcatt taaatgatat ttgtactatt gaccatcctg
1561 aagacagtga atatgaagct gaaatgtcac ttcaaggaga agtaaatatt aaatccaacc
1621 atatttcaca agagggtgtt atgcataaag aatattgtgt caaccagaaa gatttgaatg
1681 gccaagcaaa aatgatcgaa agtgtaactg acaatcaaaa atccacagag gaagtagata
1741 tgaaaaatat caacatggat aatgatctgg aggttttaac atcttctccc actaggaatt
1801 taaatggtgc ctacctaacg gaagggagca atggagaagt ggacatttcc aatggtttca
1861 aaaacctaaa tttgaatgct gctcttcatc ctgatgaaat aaatatagag attctgaatg
1921 atagtcatac tcctggaaca aaggtgtatg aggttgtaaa tgaagatcca gaaactgctt
1981 tctgtactct tgcaaacagg gaagttttca atactgatga gtgttcaatc caacattgtt
2041 tatatcagtt cacccgtaat gagaaacttc gagatgcgaa taaactgctt tgtgaagtat
2101 gcacacggag acagtgtaat ggaccaaagg caaatataaa aggtgaaagg aagcatgttt
2161 acaccaatgc caaaaagcag atgctaattt ctcttgctcc tcctgttctt actcttcatt
2221 taaagagatt tcagcaggct ggttttaacc tacgcaaagt taacaaacac ataaagtttc
2281 cggaaatctt agatttggct cctttttgca cccttaaatg taagaatgtt gcagaagaaa
2341 atacaagggt actctattcc ttatatggag ttgttgaaca cagtggtact atgaggtcgg
2401 ggcattacac tgcctatgcc aaggcaagaa ccgcaaatag tcatctctct aatcttgttc
2461 ttcacggtga tattccacaa gattttgaaa tggaatcaaa agggcagtgg tttcacatca
2521 gcgacacaca tgtacaagct gtgcctacaa ctaaagtact aaactcacaa gcgtacctcc
2581 tattttatga gagaatactg taataatatc aaaagcactt tttctggaaa cacatttatg
2641 gcttttataa tggctgaaat aacgataaaa aaagactaat taaaatcatg ttcacttaac
2701 attaaataca tgcca
//