LOCUS AK222543 1969 bp mRNA linear HUM 17-NOV-2007 DEFINITION Homo sapiens mRNA for sorting nexin 17 variant, clone: adSU01126. ACCESSION AK222543 VERSION AK222543.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1969) AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Direct Submission JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases. Contact:Akiko Tanaka RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro, Tsurumi, Yokohama, Kanagawa 230-0045, Japan URL :http://protein.gsc.riken.jp/ REFERENCE 2 AUTHORS Maruyama,K. and Sugano,S. TITLE Oligo-capping : a simple method to replace the cap structure of eucaryotic mRNAs with oligoribonucleotides. JOURNAL Gene 138, 171-174 (1994) REFERENCE 3 AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S. TITLE Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library. JOURNAL Gene 200, 149-156 (1997) COMMENT This work was supported in part by the National Project on Protein Structural and Functional Analysis, Ministry of Education, Culture, Sports, Science and Technology of Japan. Sumio Sugano, Yutaka Suzuki Laboratory of Functional Genomics Department of Medical Genome Sciences Graduate School of Frontier Sciences The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan URL: http://www.k.u-tokyo.ac.jp/index.html.en FEATURES Location/Qualifiers source 1..1969 /clone="adSU01126" /clone_lib="ad" /db_xref="H-InvDB:HIT000330323" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="this clone is also named as hss001000248" /organism="Homo sapiens" /tissue_type="adipose tissue" CDS <132..1544 /codon_start=1 /inference="non-experimental evidence, no additional details recorded" /note="Start codon is not identified." /product="sorting nexin 17 variant" /protein_id="BAD96263.1" /translation="MHFSIPETESRSGDSGGSAYVAYNIHVNGVLHCRVRYSQLLGLH EQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFL RRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKLDLPDDLIGYF SLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAYDDDVMENR VGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYGYLRFDA CVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLPSGST SSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGGSI RKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATRESVVKLSSKLSAVSLRGIGSPSTD ASASDVHGNFAFEGIGDEDL" BASE COUNT 427 a 525 c 575 g 442 t ORIGIN 1 ccacatcgga tcgcagggct cccaaaatgg cgagtgaggc tgcggggact cgctgagcag 61 cggaggggga gcgtgcagag ccgctgcggc cctcacagtc cggagcccgg ccgtgccgtg 121 ccgtagggaa catgcacttt tccattcccg aaaccgagtc ccgcagcggg gacagcggcg 181 gctccgccta cgtggcctat aacattcacg tgaatggagt cctgcactgt cgggtgcgct 241 acagccagct cctggggctg cacgagcagc ttcggaagga gtatggggcc aatgtgcttc 301 ctgcattccc cccaaagaag cttttctctc tgactcctgc tgaggtagaa cagaggagag 361 agcagttaga gaagtacatg caagctgttc ggcaagaccc attgcttggg agcagcgaga 421 ctttcaacag tttcctgcgt cgggcacaac aggagacaca gcaggtcccc acagaggaag 481 tgtccttgga agtgctgctc agcaacgggc agaaagttct ggtcaacgtg ctaacttcag 541 atcagactga ggatgtcctg gaggctgtag ctgcaaagct ggatcttcca gatgacttga 601 ttggatactt tagtctattc ttagttcgag aaaaagagga tggagccttt tcttttgtac 661 ggaagttgca agagtttgag ctgccttatg tgtctgtcac cagccttcgg agtcaagagt 721 ataagattgt gctaaggaag agttattggg actctgccta tgatgacgat gtcatggaga 781 accgggttgg cctgaacctg ctttatgctc agacggtatc agatattgag cgtgggtgga 841 tcttggtcac caaggaacag caccggcaac tcaaatctct gcaagagaaa gtctccaaga 901 aggagttcct gagactggcc cagacgctgc ggcactatgg ctacttgcgc tttgatgcct 961 gtgtggctga cttcccagaa aaggactgtc ctgtggtggt gagcgcgggc aacagtgagc 1021 tcagcctgca gctccgcctg cctggccagc aactccgaga aggctccttc cgggtcaccc 1081 gcatgcgatg ctggcgggtc acctcctctg taccattgcc cagtggaagc acgagcagcc 1141 caggccgggg ccggggtgag gtgcgcctgg aactggcttt tgaatacctc atgagcaagg 1201 accggctaca gtgggtcacc atcactagcc cccaggctat catgatgagc atctgcttgc 1261 agtccatggt tgatgaactg atggtgaaga aatctggcgg cagtatcagg aagatgctgc 1321 gccggcgggt ggggggtact ctgagacgct cagacagcca gcaagcagtg aagtccccac 1381 cactgcttga gtcacctgat gccacccggg agtctgtggt caaactctca agtaagctga 1441 gtgccgtgag cttgcgggga attggcagtc ccagcacaga tgccagtgcc agtgatgtcc 1501 acggcaattt cgccttcgag ggcattggag atgaggatct gtaatctcca ctgcttggat 1561 gtctgccctc taccccagag gaatttacag aaacttgccc tgtgcctgtg tcccccatgc 1621 taggggcgga ggggtctttt ccttcttctt tcctacctac cccttttctc ttggccaggg 1681 gcctcgtatc ctacctttcc ttgtcccctg ggctggctgc acagaggatt gccccttctc 1741 ttttcagagc tggccctcga tgccaaatta gcatttagta ttttgcacaa agtctaaggg 1801 accatggctg cctgccttgg ggaggaacca tagctccctc tgggccgctt ctggcctctt 1861 ggagccatgg gccaaaggcc aaggggatgg gcagaggtct gtgtttggtc tggcccagtt 1921 ccccatcatt aaactcagcc tgactgctgc ctaaaaaaaa aaaaaaaaa //