LOCUS AK222505 2787 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for integrin beta chain, beta 2 precursor
variant, clone: adKA03436.
ACCESSION AK222505
VERSION AK222505.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2787)
AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y.,
Tanaka,A. and Yokoyama,S.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Akiko Tanaka
RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro,
Tsurumi, Yokohama, Kanagawa 230-0045, Japan
URL :http://protein.gsc.riken.jp/
REFERENCE 2
AUTHORS Maruyama,K. and Sugano,S.
TITLE Oligo-capping : a simple method to replace the cap structure of
eucaryotic mRNAs with oligoribonucleotides.
JOURNAL Gene 138, 171-174 (1994)
REFERENCE 3
AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S.
TITLE Construction and characterization of a full length-enriched and a
5'-end-enriched cDNA library.
JOURNAL Gene 200, 149-156 (1997)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis, Ministry of Education,
Culture, Sports, Science and Technology of Japan.
Sumio Sugano, Yutaka Suzuki
Laboratory of Functional Genomics Department of Medical Genome
Sciences Graduate School of Frontier Sciences The University of
Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan
URL: http://www.k.u-tokyo.ac.jp/index.html.en
FEATURES Location/Qualifiers
source 1..2787
/clone="adKA03436"
/clone_lib="ad"
/db_xref="H-InvDB:HIT000330285"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="this clone is also named as hss001000127"
/organism="Homo sapiens"
/tissue_type="adipose tissue"
CDS <91..2400
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="integrin beta chain, beta 2 precursor variant"
/protein_id="BAD96225.1"
/translation="MLGLRPPLLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCT
WCQKLNFTGPGDPDSIRCDTRPQLLMRGCAADDIMDPTSLAETQEDHNGGQKQLSPQK
VTLYLRPGQAAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEI
TESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQ
TEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLG
AIPTPNDGRCHLEDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLT
EIIPKSAVGELSEDSSNVVHLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTH
RNQPRGDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQVLPQCECRCR
DQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSG
LGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHP
GFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGK
YISCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGRTCKERDSEGCWVAYTLEQQDGM
DRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEK
EKLKSQWNNDNPLFKSATTTVMNPKFAES"
BASE COUNT 610 a 819 c 842 g 516 t
ORIGIN
1 aggtttctag acgtgaccca gggcagactg gtagcaaagc ccccacgccc agccaggagc
61 accgccgagg actccagcac accgagggac atgctgggcc tgcgcccccc actgctcgcc
121 ctggtggggc tgctctccct cgggtgcgtc ctctctcagg agtgcacgaa gttcaaggtc
181 agcagctgcc gggaatgcat cgagtcaggg cctggctgca cctggtgcca gaagctgaac
241 ttcacagggc cgggggatcc tgactccatt cgctgcgaca cccggccaca gctgctcatg
301 aggggctgtg cggctgacga catcatggac cccacaagcc tcgctgaaac ccaggaagac
361 cacaatgggg gccagaagca gctgtcccca caaaaagtga cgctttacct gcgaccaggc
421 caggcagcag cgttcaacgt gaccttccgg cgggccaagg gctaccccat cgacctgtac
481 tatctgatgg acctctccta ctccatgctt gatgacctca ggaatgtcaa gaagctaggt
541 ggcgacctgc tccgggccct caacgagatc accgagtccg gccgcattgg cttcgggtcc
601 ttcgtggaca agaccgtgct gccgttcgtg aacacgcacc ctgataagct gcgaaaccca
661 tgccccaaca aggagaaaga gtgccagccc ccgtttgcct tcaggcacgt gctgaagctg
721 accaacaact ccaaccagtt tcagaccgag gtcgggaagc agctgatttc cggaaacctg
781 gatgcacccg agggtgggct ggacgccatg atgcaggtcg ccgcctgccc ggaggaaatc
841 ggctggcgca acgtcacgcg gctgctggtg tttgccactg atgacggctt ccatttcgcg
901 ggcgacggga agctgggcgc catcccgacc cccaacgacg gccgctgtca cctggaggac
961 aacttgtaca agaggagcaa cgaattcgac tacccatcgg tgggccagct ggcgcacaag
1021 ctggctgaaa acaacatcca gcccatcttc gcggtgacca gtaggatggt gaagacctac
1081 gagaaactca ccgagatcat ccccaagtca gccgtggggg agctgtctga ggactccagc
1141 aatgtggtcc atctcattaa gaatgcttac aataaactct cctccagggt cttcctggat
1201 cacaacgccc tccccgacac cctgaaagtc acctacgact ccttctgcag caatggagtg
1261 acgcacagga accagcccag aggtgactgt gatggcgtgc agatcaatgt cccgatcacc
1321 ttccaggtga aggtcacggc cacagagtgc atccaggagc agtcgtttgt catccgggcg
1381 ctgggcttca cggacatagt gaccgtgcag gtccttcccc agtgtgagtg ccggtgccgg
1441 gaccagagca gagaccgcag cctctgccat ggcaagggct tcttggagtg cggcatctgc
1501 aggtgtgaca ctggctacat tgggaaaaac tgtgagtgcc agacacaggg ccggagcagc
1561 caggagctgg aaggaagctg ccggaaggac aacaactcca tcatctgctc agggctgggg
1621 gactgtgtct gcgggcagtg cctgtgccac accagcgacg tccccggcaa gctgatatac
1681 gggcagtact gcgagtgtga caccatcaac tgtgagcgct acaacggcca ggtctgcggc
1741 ggcccgggga gggggctctg cttctgcggg aagtgccgct gccacccggg ctttgagggc
1801 tcagcgtgcc agtgcgagag gaccactgag ggctgcctga acccgcggcg tgttgagtgt
1861 agtggtcgtg gccggtgccg ctgcaacgta tgcgagtgcc attcaggcta ccagctgcct
1921 ctgtgccagg agtgccccgg ctgcccctca ccctgtggca agtacatctc ctgcgccgag
1981 tgcctgaagt tcgaaaaggg cccctttggg aagaactgca gcgcggcgtg tccgggcctg
2041 cagctgtcga acaaccccgt gaagggcagg acctgcaagg agagggactc agagggctgc
2101 tgggtggcct acacgctgga gcagcaggac gggatggacc gctacctcat ctatgtggat
2161 gagagccgag agtgtgtggc aggccccaac atcgccgcca tcgtcggggg caccgtggca
2221 ggcatcgtgc tgatcggcat tctcctgctg gtcatctgga aggctctgat ccacctgagc
2281 gacctccggg agtacaggcg ctttgagaag gagaagctca agtcccagtg gaacaatgat
2341 aatccccttt tcaagagcgc caccacgacg gtcatgaacc ccaagtttgc tgagagttag
2401 gagcacttgg tgaagacaag gccgtcagga cccaccatgt ctgccccatc acgcggccga
2461 gacatggctt gccacagctc ttgaggatgt caccaattaa ccagaaatcc agttattttc
2521 cgccctcaaa atgacagcca tggccggccg ggtgcttctg ggggctcgtc ggggggacag
2581 ctccactctg actggcacag tctttgcatg gagacttgag gagggagggc ttgaggttgg
2641 tgaggttagg tgcgtgtttc ctgtgcaagt caggacatca gtctgattaa aggtggtgcc
2701 aatttattta catttaaact tgtcagggta taaaatgaca tcccattaat tatattgtta
2761 atcaatcacg tgtatagaaa aaaaata
//