LOCUS       AK146677                3848 bp    mRNA    linear   HTC 06-OCT-2010
DEFINITION  Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN
            full-length enriched library, clone:I920040M20
            product:ADP-ribosyltransferase (NAD+; poly (ADP-ribose)
            polymerase) 1, full insert sequence.
ACCESSION   AK146677
VERSION     AK146677.1
KEYWORDS    HTC_FLI; HTC; CAP trapper.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3848)
  AUTHORS   Arakawa,T., Carninci,P., Fukuda,S., Hashizume,W., Hayashida,K.,
            Hori,F., Iida,J., Imamura,K., Imotani,K., Itoh,M., Kanagawa,S.,
            Kawai,J., Kojima,M., Konno,H., Murata,M., Nakamura,M.,
            Ninomiya,N., Nishiyori,H., Nomura,K., Ohno,M., Sakazume,N.,
            Sano,H., Sasaki,D., Shibata,K., Shiraki,T., Tagami,M., Tagami,Y.,
            Waki,K., Watahiki,A., Muramatsu,M. and Hayashizaki,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAR-2004) to the DDBJ/EMBL/GenBank databases.
            Contact:Yoshihide Hayashizaki
            The Institute of Physical and Chemical Research (RIKEN), Omics
            Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho,
            Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
            URL    :http://www.osc.riken.jp/
REFERENCE   2
  AUTHORS   
  CONSRTM   The FANTOM Consortium, Riken Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The Transcriptional Landscape of the Mammalian Genome
  JOURNAL   Science 309, 1559-1563 (2005)
REFERENCE   3
  AUTHORS   
  CONSRTM   RIKEN Genome Exploration Research Group and Genome Science Group
            (Genome Network Project Core Group) and the FANTOM Consortium
  TITLE     Antisense Transcription in the Mammalian Transcriptome
  JOURNAL   Science 309, 1564-1566 (2005)
REFERENCE   4
  AUTHORS   
  CONSRTM   The FANTOM Consortium and the RIKEN Genome Exploration Research
            Group Phase I and II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420, 563-573 (2002)
REFERENCE   5
  AUTHORS   
  CONSRTM   The RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409, 685-690 (2001)
REFERENCE   6
  AUTHORS   Carninci,P. and Hayashizaki,Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Meth. Enzymol. 303, 19-44 (1999)
REFERENCE   7
  AUTHORS   Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K.,
            Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res. 10, 1617-1630 (2000)
REFERENCE   8
  AUTHORS   Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N.,
            Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T.,
            Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M.,
            Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S.,
            Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y.,
            Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K.,
            Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M.,
            Inoue,Y., Kira,A. and Hayashizaki,Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system-384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res. 10, 1757-1771 (2000)
COMMENT     cDNA library was prepared and sequenced in Mouse Genome
            Encyclopedia Project of Genome Exploration Research Group in Riken
            Genomic Sciences Center and Genome Science Laboratory in RIKEN.
            Division of Experimental Animal Research in Riken contributed to
            prepare mouse tissues.
            
            Please visit our web site for further details.
            URL:http://www.osc.riken.jp/
            URL:http://fantom.gsc.riken.jp/
            
            clone information is available at:
            http://fantom.gsc.riken.jp/3/db/annotate/
            main.cgi?masterid=I920040M20
FEATURES             Location/Qualifiers
     source          1..3848
                     /clone="I920040M20"
                     /clone_lib="RIKEN full-length enriched mouse cDNA library"
                     /db_xref="FANTOM_DB:I920040M20"
                     /db_xref="MGI:3571229"
                     /db_xref="taxon:10090"
                     /dev_stage="17 days pregnant adult"
                     /mol_type="mRNA"
                     /organism="Mus musculus"
                     /sex="female"
                     /strain="C57BL/6J"
                     /tissue_type="amnion"
     CDS             81..3125
                     /codon_start=1
                     /note="ADP-ribosyltransferase (NAD+; poly (ADP-ribose)
                     polymerase) 1 (MGD|MGI:1340806 GB|NM_007415, evidence:
                     BLASTN, 99%, match=3827)"
                     /note="putative"
                     /protein_id="BAE27352.1"
                     /transl_table=1
                     /translation="MAEASERLYRVEYAKSGRASCKKCSESIPKDSLRMTIMVQSPMF
                     DGKVPHWYHFSCFWKVGHSIRQPDVEVDGFSELRWDDQQKVKKTAEAGGVAGKGQDGS
                     GGKAEKTLGDFLAEYAKSNRSMCKGCLEKIEKGQMRLSKKMVDPEKPQLGMIDRWYHP
                     TCFVKKRDELGFRPEYSASQLKGFSLLSAEDKEALKKQLPAIKNEGKRKGDEVDGTDE
                     VAKKKSKKGKDKDSSKLEKALKAQNELIWNIKDELKKACSTNDLKELLIFNQQQVPSG
                     ESAILDRVADGMAFGALLPCKECSGQLVFKSDAYYCTGDVTAWTKCMVKTQNPSRKEW
                     VTPKGFREISYLKKLKVKKQDRIFPPESSAPAPLALPLSVTSAPTAVNSSAPADKPLS
                     NMKILTLGKLSQNKDEAKAVIEKLGGKLTGSANKASLCISTKKEVEKMSKKMEEVKAA
                     NVRVVCEDFLQDVSASTKSLQELLSAHSLSSWGAEVKAEPGEVVAPKGKSAAPSKKSK
                     GAVKEEGVNKSEKRMKLTLKGGAAVDPDSGLEHSAHVLEKGGKVFSATLGLVDIVRGT
                     NSYYKLQLLEDDKESRYWIFRSWGRVGTVIGSNKLEQMPSKEDAVEHFMELYEEKTGN
                     AWHSKNFTKYPKKFYPLEIDYGQDEEAVKKLTVKPGTKSKLPKPVQELVGMIFDVESM
                     KKALVEYEIDLQKMPLGKLSRRQIQAAYSILSEVQQAVSQGSSESQILDLSNRFYTLI
                     PHDFGMKKPPLLNNADSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLK
                     TDIKVVDRDSEEAEVIRKYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHN
                     RRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGD
                     PIGLILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDPSASITLEGVEVPLG
                     TGIPSGVNDTCLLYNEYIVYDIAQVNLKYLLKLKFNFKTSLW"
     regulatory      3827..3832
                     /note="putative"
                     /regulatory_class="polyA_signal_sequence"
     polyA_site      3848
                     /note="putative"
BASE COUNT         1026 a          935 c         1091 g          796 t
ORIGIN      
        1 gacgcttgcg ggggaaaccg acacgttagc ggagcgcacc agcggcggcg tcgggctgcc
       61 gctgcagcac gagaaggagg atggcggagg cctcggagag gctttatcga gtggagtacg
      121 cgaagagcgg gcgcgcctct tgcaagaaat gcagcgagag tattcccaag gactccctcc
      181 gcatgaccat catggtgcag tcacccatgt tcgatgggaa agtcccacac tggtaccact
      241 tctcctgctt ctggaaggtg ggccactcca tccggcagcc tgatgttgag gtggatggct
      301 tctctgagct gcgctgggat gatcagcaga aggtcaagaa gacggccgag gctggaggcg
      361 tggcaggcaa aggccaggat ggaagtggcg gcaaggcgga gaagacattg ggtgactttt
      421 tagcggagta cgccaagtcc aacaggagca tgtgcaaggg ctgcctggag aagatagaga
      481 agggccagat gcgcctgtcc aagaagatgg tggatccaga gaagccacag ctgggtatga
      541 ttgaccgctg gtaccatcca acttgctttg tcaagaagcg ggacgagctg ggcttccggc
      601 ctgagtacag tgccagtcag ctcaagggct ttagcctcct ctctgcagaa gacaaagaag
      661 ctctgaagaa gcagctcccg gccatcaaga atgaaggaaa gagaaaaggt gacgaggtgg
      721 atggaacaga tgaagtggcc aaaaagaaat ctaagaaagg gaaggacaag gatagtagta
      781 agctggagaa ggccctcaag gctcagaatg agctgatctg gaatatcaaa gacgagctga
      841 agaaagcgtg ttccaccaac gacctgaagg agctgctcat cttcaaccag cagcaggtgc
      901 cgtcaggaga gtcagcgatc ttggacagag ttgctgacgg catggcgttt ggggcccttc
      961 tgccctgcaa ggagtgttca ggccagctgg tctttaagag cgacgcttat tactgtactg
     1021 gggatgtcac tgcctggacc aagtgcatgg tcaagacaca gaatcctagc cgaaaggaat
     1081 gggtaactcc aaagggattc cgagaaatat cctacctcaa gaagttaaag gtcaaaaaac
     1141 aggaccgaat attccctcca gaaagcagcg ccccagcacc actggcactg cccctctctg
     1201 tcacctcagc acccacagct gtgaactcct ctgctccagc agacaagccc ctgtctaaca
     1261 tgaagatcct gactcttggg aagctctccc agaacaagga cgaagcaaaa gctgtgattg
     1321 agaaactcgg aggcaagttg acaggatctg ccaacaaggc ctccttgtgt atcagcacta
     1381 aaaaggaggt ggagaagatg agtaagaaga tggaggaagt gaaagcggcc aacgttcgag
     1441 ttgtgtgtga ggacttcctc caggacgtgt ctgcctccac taaaagcctc caagagctgc
     1501 tctcggccca cagcttgtcc tcgtgggggg ctgaggtgaa ggcagagcct ggtgaagtgg
     1561 tggcccccaa ggggaagtca gctgcaccct ccaagaagag caagggtgct gtcaaggagg
     1621 aaggtgtcaa caaatctgaa aagaggatga aattaactct gaagggagga gcagccgttg
     1681 atcctgactc tggtctggaa cactctgcac acgtcctgga gaaaggtggg aaggtgttca
     1741 gcgccacact tggcctggtg gacattgtga gagggacgaa ctcctattac aaactgcagc
     1801 ttctggagga cgacaaggag agcaggtact ggatcttccg gtcctggggc cgggtgggca
     1861 cagttatcgg cagtaacaaa cttgagcaga tgccctccaa agaggacgct gttgagcact
     1921 tcatggagct gtatgaagag aagactggga atgcctggca ctcgaaaaac ttcacaaagt
     1981 atcccaagaa gttctaccct ctggagattg actatggcca ggacgaagag gcagtaaaga
     2041 agctgacggt gaagcctggc accaagtcga agctgccgaa gccagtgcag gagctcgtgg
     2101 ggatgatctt cgacgtggag agcatgaaaa aggccttggt ggagtacgag attgacctcc
     2161 agaagatgcc cttggggaag ctgagcagaa ggcagatcca ggccgcctac tctatcctca
     2221 gcgaggtcca gcaggcagtg tctcaaggca gcagtgaatc ccagatccta gatctctcca
     2281 atcgcttcta cactctgatc ccccatgact ttggaatgaa gaagccccca ctcctgaaca
     2341 acgcagacag cgtgcaggcc aaggtggaga tgctagacaa cctcctggac atcgaggtgg
     2401 cctatagtct tctcaggggt ggctctgacg acagcagcaa ggatcccatc gacgtcaact
     2461 acgagaaact caaaactgac attaaggtgg ttgacagaga ttctgaagag gccgaggtca
     2521 tcaggaagta cgtgaagaac actcatgcta ccacgcacaa cgcctatgac ctggaagtga
     2581 tcgatatctt caagatagag cgcgaggggg agagccagcg ctacaagccc ttcaggcagc
     2641 ttcacaaccg gaggctgctg tggcacggct ccaggaccac caactttgct ggcatcctgt
     2701 cgcagggtct gcggatagcc ccacctgaag cgcctgtgac aggctacatg tttgggaaag
     2761 ggatctactt tgccgacatg gtgtccaaaa gtgcaaacta ctgccacaca tctcagggag
     2821 acccgattgg cttaatactg ctgggagagg ttgcccttgg aaacatgtat gaactcaagc
     2881 atgcttcaca tatcagcaag ttacccaagg gcaagcacag tgtcaaaggt ttgggaaaaa
     2941 ccacccctga cccttcggcc agcatcaccc tggagggtgt agaggttcca ctgggaacag
     3001 ggatcccatc tggtgtcaac gacacctgcc tgctgtataa tgagtacatt gtctacgaca
     3061 ttgctcaggt gaatctcaaa tacctgctga aactcaagtt caattttaag acatccctgt
     3121 ggtaaagtgc gaggggtggg ctgtgcccag cacccagggc ctagggggca attctcccta
     3181 gtgcctctgc accagacacc acaaaacctc agccatgctg ccgccgaagg gtggccccct
     3241 caccgaatct ccttaggaag ggttttatac agacaggtta aagggctctg gtttcaagtc
     3301 ccttgtccat gctgcactgg ggcaggccgg ttgtttgtgg tttgtcctac cagccacagc
     3361 tccatagaca gcagctggca gtagagcaaa agttggggag aggattttgt tgtttgccta
     3421 gactagtcct gagggaagaa acaccacgtc acagtcacga tgtctgcctt actggcttcc
     3481 ccagggaagg aaaaatgtgc ttcctccctt tttttcaagg gttcatcttt gctttaattt
     3541 tggcaaaatg ttaagcattt attttgagct aaaaataaaa gttaatttca tactatatag
     3601 attttctttt ttatcttgta tgtccccctc ttagtctgct gagcttttgt tttgcttggt
     3661 tttcagtgat agacatggga tagccaaaag aagggactac ctgaaacccc taactggggc
     3721 gactgagcct gtagtgtggt cagttcaaag ttgcatttgg gattctatgt cttccaaatt
     3781 gaaccgtctg taatcagtac agccacccaa agggctatag ttctcaatta aaatgcaaat
     3841 ggatatct
//