LOCUS AK135977 682 bp mRNA linear HTC 06-OCT-2010 DEFINITION Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420443K22 product:ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase) 1, full insert sequence. ACCESSION AK135977 VERSION AK135977.1 KEYWORDS HTC_FLI; HTC; CAP trapper. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 682) AUTHORS Arakawa,T., Carninci,P., Fukuda,S., Hashizume,W., Hayashida,K., Hori,F., Iida,J., Imamura,K., Imotani,K., Itoh,M., Kanagawa,S., Kawai,J., Kojima,M., Konno,H., Murata,M., Nakamura,M., Ninomiya,N., Nishiyori,H., Nomura,K., Ohno,M., Sakazume,N., Sano,H., Sasaki,D., Shibata,K., Shiraki,T., Tagami,M., Tagami,Y., Waki,K., Watahiki,A., Muramatsu,M. and Hayashizaki,Y. TITLE Direct Submission JOURNAL Submitted (30-MAR-2004) to the DDBJ/EMBL/GenBank databases. Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL :http://www.osc.riken.jp/ REFERENCE 2 AUTHORS CONSRTM The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) TITLE The Transcriptional Landscape of the Mammalian Genome JOURNAL Science 309, 1559-1563 (2005) REFERENCE 3 AUTHORS CONSRTM RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium TITLE Antisense Transcription in the Mammalian Transcriptome JOURNAL Science 309, 1564-1566 (2005) REFERENCE 4 AUTHORS CONSRTM The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team TITLE Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs JOURNAL Nature 420, 563-573 (2002) REFERENCE 5 AUTHORS CONSRTM The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium TITLE Functional annotation of a full-length mouse cDNA collection JOURNAL Nature 409, 685-690 (2001) REFERENCE 6 AUTHORS Carninci,P. and Hayashizaki,Y. TITLE High-efficiency full-length cDNA cloning JOURNAL Meth. Enzymol. 303, 19-44 (1999) REFERENCE 7 AUTHORS Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K., Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y. TITLE Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes JOURNAL Genome Res. 10, 1617-1630 (2000) REFERENCE 8 AUTHORS Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N., Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T., Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M., Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S., Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y., Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K., Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M., Inoue,Y., Kira,A. and Hayashizaki,Y. TITLE RIKEN integrated sequence analysis (RISA) system-384-format sequencing pipeline with 384 multicapillary sequencer JOURNAL Genome Res. 10, 1757-1771 (2000) COMMENT cDNA library was prepared and sequenced in Mouse Genome Encyclopedia Project of Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in RIKEN. Division of Experimental Animal Research in Riken contributed to prepare mouse tissues. Please visit our web site for further details. URL:http://www.osc.riken.jp/ URL:http://fantom.gsc.riken.jp/ clone information is available at: http://fantom.gsc.riken.jp/3/db/annotate/ main.cgi?masterid=7420443K22 FEATURES Location/Qualifiers source 1..682 /clone="7420443K22" /clone_lib="RIKEN full-length enriched mouse cDNA library" /db_xref="FANTOM_DB:7420443K22" /db_xref="MGI:3538795" /db_xref="taxon:10090" /mol_type="mRNA" /organism="Mus musculus" /strain="C57BL/6J" /tissue_type="in vitro fertilized eggs" CDS 112..>682 /codon_start=1 /note="ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase) 1 (MGD|MGI:1340806 GB|AK088679, evidence: BLASTN, 100%, match=632)" /note="putative" /protein_id="BAE22758.1" /transl_table=1 /translation="MAEASERLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMF DGKVPHWYHFSCFWKVGHSIRQPDVEVDGFSELRWDDQQKVKKTAEAGGVAGKGQDGS GGKAEKTLGDFLAEYAKSNRSMCKGCLEKIEKGQMRLSKKMVDPEKPQLGMIDRWYHP TCFVKKRDELGFRPEYSASQLKGFSLLSAE" BASE COUNT 155 a 170 c 235 g 122 t ORIGIN 1 gagtaatcta tcctgagcgg aggcggctct gcacgcttgc gggggaaacc gacacgttag 61 cggagcgcac cagcggcggc gtcgggctgc cgctgcagca cgagaaggag gatggcggag 121 gcctcggaga ggctttatcg agtggagtac gcgaagagcg ggcgcgcctc ttgcaagaaa 181 tgcagcgaga gtattcccaa ggactccctc cgcatggcca tcatggtgca gtcacccatg 241 ttcgatggga aagtcccaca ctggtaccac ttctcctgct tctggaaggt gggccactcc 301 atccggcagc ctgatgttga ggtggatggc ttctctgagc tgcgctggga tgatcagcag 361 aaggtcaaga agacggccga ggctggaggc gtggcaggca aaggccagga tggaagtggc 421 ggcaaggcgg agaagacatt gggtgacttt ttagcggagt acgccaagtc caacaggagc 481 atgtgcaagg gctgcctgga gaagatagag aagggccaga tgcgcctgtc caagaagatg 541 gtggatccag agaagccaca gctgggtatg attgaccgct ggtaccatcc aacttgcttt 601 gtcaagaagc gggacgagct gggcttccgg cctgagtaca gtgccagtca gctcaagggc 661 tttagcctcc tctctgcaga ag //