LOCUS       AK132305                3960 bp    mRNA    linear   HTC 06-OCT-2010
DEFINITION  Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
            library, clone:4021404H12 product:forkhead box G1, full insert
            sequence.
ACCESSION   AK132305
VERSION     AK132305.1
KEYWORDS    HTC_FLI; HTC; CAP trapper.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3960)
  AUTHORS   Arakawa,T., Carninci,P., Fukuda,S., Hashizume,W., Hayashida,K.,
            Hori,F., Iida,J., Imamura,K., Imotani,K., Itoh,M., Kanagawa,S.,
            Kawai,J., Kojima,M., Konno,H., Murata,M., Nakamura,M.,
            Ninomiya,N., Nishiyori,H., Nomura,K., Ohno,M., Sakazume,N.,
            Sano,H., Sasaki,D., Shibata,K., Shiraki,T., Tagami,M., Tagami,Y.,
            Waki,K., Watahiki,A., Muramatsu,M. and Hayashizaki,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAR-2004) to the DDBJ/EMBL/GenBank databases.
            Contact:Yoshihide Hayashizaki
            The Institute of Physical and Chemical Research (RIKEN), Omics
            Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho,
            Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
            URL    :http://www.osc.riken.jp/
REFERENCE   2
  AUTHORS   
  CONSRTM   The FANTOM Consortium, Riken Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The Transcriptional Landscape of the Mammalian Genome
  JOURNAL   Science 309, 1559-1563 (2005)
REFERENCE   3
  AUTHORS   
  CONSRTM   RIKEN Genome Exploration Research Group and Genome Science Group
            (Genome Network Project Core Group) and the FANTOM Consortium
  TITLE     Antisense Transcription in the Mammalian Transcriptome
  JOURNAL   Science 309, 1564-1566 (2005)
REFERENCE   4
  AUTHORS   
  CONSRTM   The FANTOM Consortium and the RIKEN Genome Exploration Research
            Group Phase I and II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420, 563-573 (2002)
REFERENCE   5
  AUTHORS   
  CONSRTM   The RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409, 685-690 (2001)
REFERENCE   6
  AUTHORS   Carninci,P. and Hayashizaki,Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Meth. Enzymol. 303, 19-44 (1999)
REFERENCE   7
  AUTHORS   Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K.,
            Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res. 10, 1617-1630 (2000)
REFERENCE   8
  AUTHORS   Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N.,
            Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T.,
            Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M.,
            Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S.,
            Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y.,
            Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K.,
            Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M.,
            Inoue,Y., Kira,A. and Hayashizaki,Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system-384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res. 10, 1757-1771 (2000)
COMMENT     cDNA library was prepared and sequenced in Mouse Genome
            Encyclopedia Project of Genome Exploration Research Group in Riken
            Genomic Sciences Center and Genome Science Laboratory in RIKEN.
            Division of Experimental Animal Research in Riken contributed to
            prepare mouse tissues.
            
            Please visit our web site for further details.
            URL:http://www.osc.riken.jp/
            URL:http://fantom.gsc.riken.jp/
            
            clone information is available at:
            http://fantom.gsc.riken.jp/3/db/annotate/
            main.cgi?masterid=4021404H12
FEATURES             Location/Qualifiers
     source          1..3960
                     /clone="4021404H12"
                     /clone_lib="RIKEN full-length enriched mouse cDNA library"
                     /db_xref="FANTOM_DB:4021404H12"
                     /db_xref="MGI:3533023"
                     /db_xref="taxon:10090"
                     /dev_stage="15 days embryo"
                     /mol_type="mRNA"
                     /organism="Mus musculus"
                     /strain="C57BL/6J"
                     /tissue_type="head"
     CDS             1592..3037
                     /codon_start=1
                     /note="forkhead box G1 (MGD|MGI:1347464 GB|BC064449,
                     evidence: BLASTN, 99%, match=2877)"
                     /note="putative"
                     /protein_id="BAE21092.1"
                     /transl_table=1
                     /translation="MLDMGDRKEVKMIPKSSFSINSLVPEAVQNDNHHASHGHHNSHH
                     PQHHHHHHHHHHPPPPAPQPPPPPPQQQQQQPPPAPQPPQARGAPAADDDKGPQPLLL
                     PPSTALDGAKADALGAKGEPGGGPAELAPVGPDEKEKGAGAGGEEKKGAGEGGKDGEG
                     GKEGDKKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ
                     NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTTSRAKL
                     AFKRGARLTSTGLTFMDRAGSLYWPMSPFLSLHHPRASSTLSYNGTTSAYPSHPMPYS
                     SVLTQNSLGNNHSFSTANGLSVDRLVNGEIPYATHHLTAAALAASVPCGLSVPCSGTY
                     SLNPCSVNLLAGQTSYFFPHVPHPSMTSQTSTSMSARAASSSTSPQAPSTLPCESLRP
                     SLPSFTTGLSGGLSDYFTHQNQGSSSNPLIH"
     regulatory      3940..3945
                     /note="putative"
                     /regulatory_class="polyA_signal_sequence"
     polyA_site      3960
                     /note="putative"
BASE COUNT          831 a         1261 c         1046 g          822 t
ORIGIN      
        1 tttccagcag catccaagaa gggtaagagc tgatttcgcc ctactggtgt ttcaagattg
       61 aggttttaaa gagataaagt atttgtgaaa tgggaaaaag gagcaaacat aggatttaaa
      121 aaaaaaaaaa acggaagtag acgcccactc atattttctt caatgtcaag caaaatgaaa
      181 atatttccag gatgatcgat cgcggctacc ggcttccagt actgcctaga agctgaagag
      241 gaggtggagt gcccgaggag acaactgcca ccgggtcacc cgcgcgtgag cgcgactctg
      301 ggagtgaagc gagacggagg gagaacacac gtgttacctg ctttatttcg ggactgtttg
      361 ggtctgtgct cgcccggggc agctctccgc ccgcccgccc gcgtgcgtgg aaggcctcca
      421 cagaacgcac ccaccgctca gccgcccccg ctcgccgccc tcagcccagc ttcacagccg
      481 agctcgccgc gggccgcagg aagctgtaag taccggcctg gccgtggccg cccccgcccc
      541 accttccagg ccccgttccc ccgatgcccg gctctccgga gcttgctggc ccgctcgctc
      601 ccagggcgct gccggggccg ccgcgtcccc agggttcacg ccctctcccg caccctcgca
      661 gctcgcccct ccgccgcgcc ccccgccccg ctcttccaga caaaattgga tacaaacttt
      721 aatcaataag gataaatatt gacgcgcaaa ggaaaataat cccatacagg gaggaggcca
      781 cagtcgagcg gccgcggccc ggggcgcacg ccccacgcta atcctggccg ggtgggcgat
      841 ctcccgccgg tccccgcggc tccaggcctg ggccccgcca cccggagggg gcggtgagcg
      901 gggggcgggg ccggggcggg gcggggatgg gcgggccctg ggcccccgat tggtcgacgg
      961 ctagccagac gctcctgcac gccggcggca ctgattggtt cggcagtagg aaaggttaaa
     1021 ccaaaaattt ttttacagcc ctagtgtgcg cctgtagctc ggaaaattaa ttgtggctat
     1081 agctgcctcg atcgctgtct cctagcctcg ctgcggccgc tccgggacgc gcccgcccgc
     1141 cgcccggctc tccccccctt cgggctgccg ctgctgctgc tgtgactgct gcggcgcgag
     1201 gaggaggagg cagcggggga gggggaggcc gggcgcggaa cggagcgggg cgctgcaccc
     1261 cgggcgacgg gttgcttctg cctctagcct ccctctctct ctctctctct ctctctctct
     1321 ctctctctct ctctctctct ctctctccct ctctctctct ctctccctct ctctttctct
     1381 ctctaattct tgaggggtgg ttgcagcttt tgctacatgc cttgccagcg ccggagcctg
     1441 cggtccaact gcgctgctgc cggagcgctc agtgccgcct ccgctgcccg ctccccccgc
     1501 gccccactcc gaacccgctg gtcgcccgcc gcgctgctgc ccggctcccg tgccgccgcc
     1561 gccgccgccg ccgccccccg acgcctgggt gatgctggac atgggagata ggaaagaggt
     1621 gaaaatgatt cccaagtcct cgttcagcat caacagcctg gtccccgagg ccgtccagaa
     1681 cgacaaccac cacgcgagcc acggccacca caacagccac cacccccagc atcaccatca
     1741 tcatcaccac caccaccacc cgccgccgcc cgcgccccag ccgcctccac cgccgcccca
     1801 gcagcagcag cagcagccgc ccccggcccc gcagcccccg caggcgcgcg gcgccccagc
     1861 agccgacgac gacaagggtc cccagccgct cctgctcccg ccctccaccg ccctggacgg
     1921 ggccaaggct gacgcacttg gagccaaagg cgagccgggc ggcgggccgg cggagctggc
     1981 gcccgtcggg ccggacgaga aggagaaggg cgcgggcgcc gggggggagg agaagaaagg
     2041 ggcgggcgag ggcggcaagg acggggaggg gggcaaggag ggcgacaaga agaacggcaa
     2101 gtacgagaag ccgccgttca gctacaacgc gctcatcatg atggccatca ggcagagtcc
     2161 cgagaagcgc ctgacgctca atggcatcta tgagttcatc atgaagaact tcccctacta
     2221 ccgcgagaac aagcagggct ggcagaactc catccgccac aacctgtccc tcaacaagtg
     2281 cttcgtgaag gtaccgcgcc actacgacga cccgggcaag ggcaactact ggatgctcga
     2341 cccgtcgagc gacgacgtgt tcatcggcgg cacgaccggc aagctgcggc gccgctccac
     2401 cacgtctcgg gccaagctgg cctttaagcg cggggcgcgc ctcacctcca ccggcctcac
     2461 cttcatggac cgcgccggct ccctctactg gcccatgtcg cccttcctgt ccctgcacca
     2521 cccccgcgcc agcagcactt tgagttacaa cgggaccacg tcggcctacc ccagccaccc
     2581 catgccctac agctccgtgt tgactcaaaa ctcgctgggc aacaaccact ccttctccac
     2641 cgccaacggg ctgagtgtgg accggctggt caacggggag atcccgtacg ccacgcacca
     2701 cctcacggcc gctgcgctcg ccgcctcggt gccctgcggc ctgtcggtgc cctgctccgg
     2761 gacctactcc ctcaacccct gctccgtcaa cctgctcgcg ggccagacca gttacttttt
     2821 cccccacgtc ccgcacccgt caatgacttc gcagaccagc acgtccatga gcgcccgggc
     2881 cgcgtcctcc tctacgtcgc cgcaggcccc ctcgaccctg ccctgtgagt ctttaagacc
     2941 ctctttgcca agttttacga caggactgtc cgggggactg tctgattatt tcacacatca
     3001 aaatcagggg tcttcttcca accctttaat acattaacat ccgggggacc agactgtaag
     3061 tgaacgtttt acacacattt gcattgtaaa tgataattaa aaaaataagt ccaggtattt
     3121 tttattaagc cccccctccc catttctgta cgtttgttca gtctttaggg ttgtttacta
     3181 ttctaacacg gtgtggagtg tcagcgaggt gcaatgtggg agaatacatt gtagaatata
     3241 aggtttggac gtcaaattat agtagaatgt gtatctaaat agtgactgct ttgccatttc
     3301 attcaaacct gacaagtcta tctcaacagg ctgccagatt tccatgtgtg cagtattata
     3361 agttatcatg gagctatctg gtggacgcag gccttgagaa caacctaaat tatgaagaga
     3421 gttttaaaat gttaaattgt aatttgtatt taagaatttg tagtaaaggt gcccaaggaa
     3481 ttatattggc catttattgt tttgtccttt ttctttaaag aactgtttct ttccttttgt
     3541 ttacttttag accaaagatt ggattctagc aaatgcactt ggtatactaa gtattaaaac
     3601 aagtaaacaa acaaacgaaa aaggaaggtt gtttagttgg caacactgcc cattcaattg
     3661 aatccgaagg agacaaaatt aaggattgcc ttcagtttgt gttgtgtata tttcgatgta
     3721 tgtggtcact aacaggtcac ttttattttt tctaaatgta gtgaaatgtt aatacctatt
     3781 gtacttatag gtaaaccttg caaatatgta acctgtgttg cgcaaatgcc gcatcaattt
     3841 gagtgattgt taatgttgtc ttaaaatttc ttgattgtga tactgtggtc atatgcccgt
     3901 gtttgtcact tacaaaaatg tttactatga acacacagaa ataaaaaata ggctaaattc
//